RNA–Protein interactions for RNA: ENST00000436675.5

HDAC8-213, Transcript of histone deacetylase 8, humanhuman

TSL 5

Gene HDAC8, Length 908 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-213ENST00000436675 LINGO1Q96FE5 620 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SMIM10Q96HG1 83 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SCYL1Q96KG9 808 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 C18orf12Q96KH6 178 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 CAPZA3Q96KX2 299 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 MDFIQ99750 246 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 IL1RL2Q9HB29 575 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SEMA4BQ9NPR2 832 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-213ENST00000436675 TUBA8Q9NY65 449 aaPredicted RBP13.72□□□□□ -0.21
HDAC8-213ENST00000436675 SPRR3Q9UBC9 169 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 MYOTQ9UBF9 498 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 FBXO5Q9UKT4 447 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 MMACHCQ9Y4U1 282 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 COMMD10Q9Y6G5 202 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 KIAA1549Q9HCM3 1950 aa13.72□□□□□ -0.21
HDAC8-213ENST00000436675 ZANQ9Y493 2812 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 ZCWPW2A0A1B0GU75 182 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 PABPN1LA6NDY0 278 aaKnown RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 URADA6NGE7 173 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 EIF3FO00303 357 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 SYT5O00445 386 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 NRDCO43847 1150 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 IFNA16P05015 189 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 INHBBP09529 407 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 BMP5P22003 454 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 TACR1P25103 407 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 AHRP35869 848 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 PGGT1BP53609 377 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 WNT3P56703 355 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 SARNPP82979 210 aaKnown RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 SP140Q13342 867 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 TERF2Q15554 542 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 RIPPLY2Q5TAB7 128 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 RTL4Q6ZR62 310 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 STRA8Q7Z7C7 330 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 SCUBE1Q8IWY4 988 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 ZNF321PQ8N8H1 164 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 FAM47BQ8NA70 645 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 RELL2Q8NC24 303 aaPredicted RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 OR56A3Q8NH54 315 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 FAM222BQ8WU58 562 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 SARAFQ96BY9 339 aa13.71□□□□□ -0.21
HDAC8-213ENST00000436675 CLK4Q9HAZ1 481 aaKnown RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 IARS2Q9NSE4 1012 aaKnown RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 PPIEQ9UNP9 301 aaKnown RBP13.71□□□□□ -0.21
HDAC8-213ENST00000436675 TRGV5A0A0B4J1U4 118 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 SDR42E2A6NKP2 422 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 KIAA1324LA8MWY0 1029 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-213ENST00000436675 ZNF354AO60765 605 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CCL3P10147 92 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 ENDOUP21128 410 aaKnown RBP13.7□□□□□ -0.22
HDAC8-213ENST00000436675 PIGAP37287 484 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 HK2P52789 917 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CDKN2DP55273 166 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CCZ1BP86790 482 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CCZ1P86791 482 aaPredicted RBP13.7□□□□□ -0.22
HDAC8-213ENST00000436675 REEP5Q00765 189 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 GPS1Q13098 491 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 HSP90AA5PQ58FG0 334 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 RBM20Q5T481 1227 aaKnown RBP13.7□□□□□ -0.22
HDAC8-213ENST00000436675 LRRC8EQ6NSJ5 796 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 UGT3A1Q6NUS8 523 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 HSDL2Q6YN16 418 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 TMPRSS11BQ86T26 416 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 PRIMA1Q86XR5 153 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 TRPV3Q8NET8 790 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CCT6BQ92526 530 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 FAR2Q96K12 515 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 ADAP2Q9NPF8 381 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 SACM1LQ9NTJ5 587 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 B4GALT7Q9UBV7 327 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 DYRK1BQ9Y463 629 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CLDN16Q9Y5I7 305 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 MAD1L1Q9Y6D9 718 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 CLCA3PQ9Y6N3 262 aa13.7□□□□□ -0.22
HDAC8-213ENST00000436675 ARID1AO14497 2285 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 KDM4EB2RXH2 506 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-213ENST00000436675 SUSD5O60279 629 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 P04436 131 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 ASCL1P50553 236 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 FOXO1Q12778 655 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 DRICH1Q6PGQ1 229 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-213ENST00000436675 SEM1Q6ZVN7 128 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 VWA5B2Q8N398 1253 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 TMEM132CQ8N3T6 1108 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 NAXEQ8NCW5 288 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 LINC01560Q8TB33 94 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 CALML6Q8TD86 181 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 RNASE6Q93091 150 aaKnown RBP13.69□□□□□ -0.22
HDAC8-213ENST00000436675 KIAA1191Q96A73 305 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 BAG1Q99933 345 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-213ENST00000436675 SH3GL2Q99962 352 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 AIF1LQ9BQI0 150 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 OR8D2Q9GZM6 311 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 ZNF395Q9H8N7 513 aaPredicted RBP13.69□□□□□ -0.22
HDAC8-213ENST00000436675 TAS2R13Q9NYV9 303 aa13.69□□□□□ -0.22
HDAC8-213ENST00000436675 MAGEB16A2A368 324 aa13.68□□□□□ -0.22
HDAC8-213ENST00000436675 HSPB2A8KAH6 182 aa13.68□□□□□ -0.22
HDAC8-213ENST00000436675 FAM47E-STBD1D6RA91 191 aa13.68□□□□□ -0.22
HDAC8-213ENST00000436675 CLDN4O14493 209 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms