RNA–Protein interactions for RNA: ENST00000436554.5

LINC00271-202, long intergenic non-protein coding RNA 271, humanhuman

TSL 5 BASIC

Gene LINC00271, Length 655 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00271-202ENST00000436554 ANKRD53Q8N9V6 530 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 SARAFQ96BY9 339 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 PBKQ96KB5 322 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 HIST1H2AHQ96KK5 128 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 RASL10BQ96S79 203 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 OSBPL9Q96SU4 736 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 HIST1H2AJQ99878 128 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 AARSD1Q9BTE6 412 aaKnown RBP10.71□□□□□ -0.69
LINC00271-202ENST00000436554 H2AFJQ9BTM1 129 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 EXO5Q9H790 373 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 SEMA4BQ9NPR2 832 aaPredicted RBP10.71□□□□□ -0.69
LINC00271-202ENST00000436554 SAMD15Q9P1V8 674 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 PYCARDQ9ULZ3 195 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 ZKSCAN5Q9Y2L8 839 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 MMACHCQ9Y4U1 282 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 CLDN16Q9Y5I7 305 aa10.71□□□□□ -0.69
LINC00271-202ENST00000436554 JMJD1CQ15652 2540 aa10.71□□□□□ -0.7
LINC00271-202ENST00000436554 MAGEB16A2A368 324 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 URADA6NGE7 173 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 C4orf51C9J302 202 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 FAM47E-STBD1D6RA91 191 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 GOLGA8MH3BSY2 632 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TGFBR3LH3BV60 316 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 EIF3FO00303 357 aaPredicted RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 KRT14P02533 472 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 GABRA1P14867 456 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TPSB2P20231 275 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 AHRP35869 848 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 SLC1A2P43004 574 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 DNASE1L1P49184 302 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 BTN3A2P78410 334 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TIAL1Q01085 375 aaKnown RBP eCLIP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 BMPR2Q13873 1038 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 RUNX2Q13950 521 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 RBBP5Q15291 538 aaKnown RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TPSAB1Q15661 275 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 FBXW10Q5XX13 1052 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 DUPD1Q68J44 220 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 PAQR3Q6TCH7 311 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 RTL4Q6ZR62 310 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 FAM47EQ6ZV65 393 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 SEM1Q6ZVN7 128 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 CAND1Q86VP6 1230 aaKnown RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 SCUBE1Q8IWY4 988 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 OR56A3Q8NH54 315 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 ANP32BQ92688 251 aaKnown RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 RNASE6Q93091 150 aaKnown RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 ZNF669Q96BR6 464 aaPredicted RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 SCYL1Q96KG9 808 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 AICDAQ9GZX7 198 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 NEUROD4Q9HD90 331 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 PRTFDC1Q9NRG1 225 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TUBA8Q9NY65 449 aaPredicted RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 SPRR3Q9UBC9 169 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 B4GALT7Q9UBV7 327 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TRMT6Q9UJA5 497 aaKnown RBP10.7□□□□□ -0.7
LINC00271-202ENST00000436554 FBXO5Q9UKT4 447 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 COMMD10Q9Y6G5 202 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 MPDZO75970 2070 aa10.7□□□□□ -0.7
LINC00271-202ENST00000436554 TRGV5A0A0B4J1U4 118 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 ZCWPW2A0A1B0GU75 182 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 MYOCOSA0A1B0GUC4 107 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SDR42E2A6NKP2 422 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HSPB2A8KAH6 182 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 PGRMC1O00264 195 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 ZNF354AO60765 605 aaPredicted RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 LY6G6DO95868 133 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 ENDOUP21128 410 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 BMP5P22003 454 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 RGS4P49798 205 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HNRNPFP52597 415 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SARNPP82979 210 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 DHX9Q08211 1270 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SLC13A2Q13183 592 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HSPB2Q16082 182 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HYAL4Q2M3T9 481 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 TOR1AIP1Q5JTV8 583 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 UGT3A1Q6NUS8 523 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 CCDC137Q6PK04 289 aaKnown RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HSDL2Q6YN16 418 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 MYO1HQ8N1T3 1032 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 RELL2Q8NC24 303 aaPredicted RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 TMEM52Q8NDY8 209 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 TRPV3Q8NET8 790 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 LINC01560Q8TB33 94 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 NUDT8Q8WV74 236 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SLC5A11Q8WWX8 675 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 NEIL2Q969S2 332 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 CAPZA3Q96KX2 299 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 TSNARE1Q96NA8 513 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 NDNQ99608 321 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SH3GL2Q99962 352 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 ZNF395Q9H8N7 513 aaPredicted RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 PLEKHF2Q9H8W4 249 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 HOMER3Q9NSC5 361 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SACM1LQ9NTJ5 587 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 C20orf96Q9NUD7 363 aaPredicted RBP10.69□□□□□ -0.7
LINC00271-202ENST00000436554 ARL15Q9NXU5 204 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 SNX12Q9UMY4 172 aa10.69□□□□□ -0.7
LINC00271-202ENST00000436554 CLCA3PQ9Y6N3 262 aa10.69□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 65.2 ms