RNA–Protein interactions for RNA: ENST00000435213.6

GARNL3-205, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 2 BASIC

Gene GARNL3, Length 3,599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-205ENST00000435213 SBF1O95248 1867 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SHROOM3Q8TF72 1996 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SMLR1H3BR10 107 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NME4O00746 187 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 UBE2CO00762 179 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 B4GALT5O43286 388 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TGM5O43548 720 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NOBOXO60393 691 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PGLSO95336 258 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 LDLRP01130 860 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 IL7RP16871 459 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TSPAN8P19075 237 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 UBA1P22314 1058 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MAPK1P28482 360 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF81P51508 661 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MEF2AQ02078 507 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 LMAN2Q12907 356 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DDX39BQ13838 428 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DGCR6Q14129 220 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 GK2Q14410 553 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TOMM34Q15785 309 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FNDC3BQ53EP0 1204 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 BLOC1S3Q6QNY0 202 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FAM111BQ6SJ93 734 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ATRAIDQ6UW56 229 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 USP30Q70CQ3 517 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 LRRC8DQ7L1W4 858 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 NPAS4Q8IUM7 802 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CMTR2Q8IYT2 770 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PAPD5Q8NDF8 572 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 OR13C3Q8NGS6 347 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 CEP76Q8TAP6 659 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 BRI3BPQ8WY22 251 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ARMC5Q96C12 935 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TRMT61AQ96FX7 289 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 MAGEB5Q9BZ81 275 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 FAM86C1Q9NVL1 165 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PRMT7Q9NVM4 692 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SCN3BQ9NY72 215 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 DNAJB9Q9UBS3 223 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 GPR160Q9UJ42 338 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 SCP2D1Q9UJQ7 156 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF214Q9UL59 606 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PLEKHA6Q9Y2H5 1048 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PCDHB7Q9Y5E2 793 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PCDHGC4Q9Y5F7 938 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PCDHGA6Q9Y5G7 932 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PCDHGA5Q9Y5G8 931 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 PCDHGA1Q9Y5H4 931 aa7.05□□□□□ -1.28
GARNL3-205ENST00000435213 ZFC3H1O60293 1989 aaKnown RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 TP53BP1Q12888 1972 aaPredicted RBP7.05□□□□□ -1.28
GARNL3-205ENST00000435213 M0R233 179 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 SNAPC5O75971 98 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 OTCP00480 354 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 F7P08709 466 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 HTR1AP08908 422 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF888P0CJ79 500 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 UMPSP11172 480 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 MUC1P15941 1255 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 SHMT2P34897 504 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 RFC2P35250 354 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 AVPR1AP37288 418 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 ZNF280AP59817 542 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 NUTF2P61970 127 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 IL18R1Q13478 541 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 USF2Q15853 346 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 TMEM35AQ53FP2 167 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 CERCAMQ5T4B2 595 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 GLYATQ6IB77 296 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 EIF3MQ7L2H7 374 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 DENND6AQ8IWF6 608 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 SKA3Q8IX90 412 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 DNAJC22Q8N4W6 341 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 DMBX1Q8NFW5 382 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 SLC38A4Q969I6 547 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 HDAC10Q969S8 669 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 PABPC5Q96DU9 382 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 WBP1Q96G27 269 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 AURKBQ96GD4 344 aaPredicted RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 COQ10AQ96MF6 247 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 SLC38A3Q99624 504 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 B3GNT5Q9BYG0 378 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 NFKBIZQ9BYH8 718 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 TMPRSS5Q9H3S3 457 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 INTS6Q9UL03 887 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 ADAMTS5Q9UNA0 930 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 GOLT1BQ9Y3E0 138 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 PDCD11Q14690 1871 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 FAM95CA0A1B0GW59 222 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 H7C1Q1 480 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 K7ERQ8 282 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 NRP1O14786 923 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 HCRTR2O43614 444 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 MRPS14O60783 128 aaKnown RBP7.04□□□□□ -1.28
GARNL3-205ENST00000435213 RD3LP0DJH9 198 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 THRBP10828 461 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 JUNDP17535 347 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 HDCP19113 662 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 NMBRP28336 390 aa7.04□□□□□ -1.28
GARNL3-205ENST00000435213 MATKP42679 507 aa7.04□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms