RNA–Protein interactions for RNA: ENST00000433355.6

SHPRH-205, Transcript of SNF2 histone linker PHD RING helicase, humanhuman

TSL 1 (best)

Gene SHPRH, Length 11,660 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHPRH-205ENST00000433355 CPA4Q9UI42 421 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 EMCNQ9ULC0 261 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 NAALAD2Q9Y3Q0 740 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 POLR3HQ9Y535 204 aaPredicted RBP3.62□□□□□ -1.83
SHPRH-205ENST00000433355 ENPP4Q9Y6X5 453 aa3.62□□□□□ -1.83
SHPRH-205ENST00000433355 TARM1B6A8C7 271 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CDK14O94921 469 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 VAMP5O95183 116 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 MYL9P24844 172 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 FMO4P31512 558 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 AKT2P31751 481 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GPC1P35052 558 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SLC25A3Q00325 362 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 NOXRED1Q6NXP6 359 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PLEKHM3Q6ZWE6 761 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ABTB1Q969K4 478 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CELF6Q96J87 481 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ACOX2Q99424 681 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ENPP5Q9UJA9 477 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PRELID1Q9Y255 219 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 MYO1GB0I1T2 1018 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PIP5K1BO14986 540 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 IFNA7P01567 189 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 HSMCR30P0CW71 290 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 T-ENOLP0DO92 83 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 LAMP2P13473 410 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ALOX12P18054 663 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 FPR3P25089 353 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 NMBRP28336 390 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GPR1P46091 355 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GPR143P51810 404 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SRPXP78539 464 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CYCSP99999 105 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 NPRL3Q12980 569 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CAMK1Q14012 370 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 UBAP2LQ14157 1087 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TRIM71Q2Q1W2 868 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 UGT2A3Q6UWM9 527 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 C12orf40Q86WS4 652 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PLA2G15Q8NCC3 412 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 C17orf47Q8NEP4 570 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 OR2T33Q8NG76 320 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SGCDQ92629 289 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 EXOC2Q96KP1 924 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PRRC1Q96M27 445 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 RNF208Q9H0X6 261 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 A4GALTQ9NPC4 353 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF490Q9ULM2 529 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 MMACHCQ9Y4U1 282 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PCDHGA7Q9Y5G6 932 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 FAM172BPA6NC97 362 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 OR6C74A6NCV1 312 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GABARAPO95166 117 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TP53P04637 393 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 UGT2B10P36537 528 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 EIF2S3P41091 472 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 EMC4Q5J8M3 183 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ESRP1Q6NXG1 681 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CYP4X1Q8N118 509 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SYS1Q8N2H4 156 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SLC25A41Q8N5S1 370 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 NMD3Q96D46 503 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SLC30A2Q9BRI3 323 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TMPRSS4Q9NRS4 437 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ITM2AO43736 263 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 RASGRP1O95267 797 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 FGF9P31371 208 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SPINT3P49223 89 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 RORCP51449 518 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SLC10A7Q0GE19 358 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TOMM34Q15785 309 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 QPCTQ16769 361 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CYBRD1Q53TN4 286 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 HLA-DQA1Q5Y7H0 255 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 KDM4DQ6B0I6 523 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ANKRD13BQ86YJ7 626 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 DENND1CQ8IV53 801 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 UBE2J2Q8N2K1 259 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 NKAIN3Q8N8D7 197 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 OR5L2Q8NGL0 311 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 KLHL6Q8WZ60 621 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 UFD1Q92890 307 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PYURFQ96I23 114 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 SGPP1Q9BX95 441 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 Q9N2J8 555 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ACP6Q9NPH0 428 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PACSIN3Q9UKS6 424 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 OAZ3Q9UMX2 235 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 A0A0J9YVX5 310 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ACOD1A6NK06 481 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GJE1A6NN92 205 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 PGRMC2O15173 223 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 GUCA1CO95843 209 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 ZNF24P17028 368 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TYRP1P17643 537 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 TCN1P20061 433 aaPredicted RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 RPL10P27635 214 aaKnown RBP3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CCR5P51681 352 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 CDH11P55287 796 aa3.61□□□□□ -1.83
SHPRH-205ENST00000433355 HSD17B7P56937 341 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms