RNA–Protein interactions for RNA: ENST00000431429.1

HMGB1P27-201, Transcript of high mobility group box 1 pseudogene 27, humanhuman

BASIC

Gene HMGB1P27, Length 603 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P27-201ENST00000431429 DPEP2Q9H4A9 486 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 VIPAS39Q9H9C1 493 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ACOXLQ9NUZ1 547 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 KCNN3Q9UGI6 736 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ODF2LQ9ULJ1 636 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ERVK-19Q9WJR5 959 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 SH3GLB1Q9Y371 365 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ETV7Q9Y603 341 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 COLEC10Q9Y6Z7 277 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 AGLP35573 1532 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 ZMYM4Q5VZL5 1548 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 NPC1L1Q9UHC9 1359 aa2.72□□□□□ -1.97
HMGB1P27-201ENST00000431429 CDK12Q9NYV4 1490 aaPredicted RBP2.71□□□□□ -1.97
HMGB1P27-201ENST00000431429 UBE4BO95155 1302 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ABCA8O94911 1581 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CFAP74Q9C0B2 1584 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 PTPRUQ92729 1446 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCDC162PA2VCL2 907 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CHUKO15111 745 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 LRCH4O75427 683 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CSDE1O75534 798 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 FGF19O95750 216 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC4A1P02730 911 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 AMBPP02760 352 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 PGK2P07205 417 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CHRNGP07510 517 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SERPINF2P08697 491 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 B4GALT1P15291 398 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 AREGP15514 252 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MAPK3P27361 379 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 TNFRSF4P43489 277 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 XGP55808 180 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 HUNKP57058 714 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 GFPT1Q06210 699 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CNTN1Q12860 1018 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 GIT2Q14161 759 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SMC1AQ14683 1233 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR1C1Q15619 314 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 LRRC37A5PQ49AS3 106 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ADAMTSL4-AS1Q5T5F5 129 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ATP1A1-AS1Q5TC04 95 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ARHGEF16Q5VV41 709 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 PRAMEF7Q5VXH5 474 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZCCHC12Q6PEW1 402 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 FIP1L1Q6UN15 594 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MFSD7Q6UXD7 560 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MACC1Q6ZN28 852 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 C17orf107Q6ZR85 190 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 Q6ZRP5 223 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MIER3Q7Z3K6 550 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 NLRP14Q86W24 1093 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 THEM5Q8N1Q8 247 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCDC185Q8N715 623 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 NIPA2Q8N8Q9 360 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 OR4A16Q8NH70 328 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SPATA18Q8TC71 538 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 DQX1Q8TE96 717 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SMAP2Q8WU79 429 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 UBTD2Q8WUN7 234 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SUSD6Q92537 303 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 P3H4Q92791 437 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 GLYATL1Q969I3 302 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 OMA1Q96E52 524 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPR137Q96N19 417 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 INPP4AQ96PE3 977 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 LITAFQ99732 161 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ABCG8Q9H221 673 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZCCHC3Q9NUD5 404 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 EPS15L1Q9UBC2 864 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 SPASTQ9UBP0 616 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 POLKQ9UBT6 870 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 PLEKHA6Q9Y2H5 1048 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MRPS2Q9Y399 296 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 STRAPQ9Y3F4 350 aaKnown RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 MTF2Q9Y483 593 aaPredicted RBP2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 BIVM-ERCC5R4GMW8 1640 aa2.71□□□□□ -1.98
HMGB1P27-201ENST00000431429 NPHP4O75161 1426 aaPredicted RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 A0A087WYN8 130 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 IGHV3-20A0A0C4DH32 117 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MACROD2A1Z1Q3 448 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MEIOCA2RUB1 952 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 KRT87PA6NCN2 255 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 CCDC69A6NI79 296 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 KPNA7A9QM74 516 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 PRSS44E7EML9 344 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 ANHXE9PGG2 379 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 NPIPB9F8W1W9 429 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SLC1A7O00341 560 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MAGEB2O15479 319 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 ZNF432O94892 652 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 ANGPTL1O95841 491 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 TXNDC12O95881 172 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SP1P08047 785 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SELEP16581 610 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 C4BPBP20851 252 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 HLA-FP30511 346 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 SFNP31947 248 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 MAP2K2P36507 400 aa2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 FEN1P39748 380 aaKnown RBP2.7□□□□□ -1.98
HMGB1P27-201ENST00000431429 GPC3P51654 580 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms