RNA–Protein interactions for RNA: ENST00000430682.5

SMPD4-204, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 3

Gene SMPD4, Length 820 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-204ENST00000430682 TYK2P29597 1187 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SERPINB8P50452 374 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 MTTPP55157 894 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 AP2B1P63010 937 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 LAPTM5Q13571 262 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 OR1C1Q15619 314 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 MEP1AQ16819 746 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 PFKFB4Q16877 469 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 RPS19BP1Q86WX3 136 aaKnown RBP11.69□□□□□ -0.54
SMPD4-204ENST00000430682 CTAGE4Q8IX94 777 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 BCORP1Q8N888 145 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF321PQ8N8H1 164 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 ISL2Q96A47 359 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SCMH1Q96GD3 660 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SEC16BQ96JE7 1060 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SERINC2Q96SA4 455 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 PAFAH2Q99487 392 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 FMO2Q99518 471 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 VPS11Q9H270 941 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 OR51B5Q9H339 312 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 LIN28AQ9H9Z2 209 aaKnown RBP11.69□□□□□ -0.54
SMPD4-204ENST00000430682 PRTFDC1Q9NRG1 225 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 PNO1Q9NRX1 252 aaKnown RBP11.69□□□□□ -0.54
SMPD4-204ENST00000430682 CPSF2Q9P2I0 782 aaKnown RBP11.69□□□□□ -0.54
SMPD4-204ENST00000430682 TEKT2Q9UIF3 430 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 SLC5A6Q9Y289 635 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 MMACHCQ9Y4U1 282 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 CACNA1CQ13936 2221 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 FBN2P35556 2912 aa11.69□□□□□ -0.54
SMPD4-204ENST00000430682 WASHC1A8K0Z3 465 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 POC1B-GALNT4F8VUJ3 575 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 OR7A17O14581 309 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 LRRTM2O43300 516 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 LDB3O75112 727 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ETHE1O95571 254 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 EPB42P16452 691 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 PHBP35232 272 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 PIK3CGP48736 1102 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 HSD17B7P56937 341 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 MLF1P58340 268 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ID2Q02363 134 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ELOAQ14241 798 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ACAP2Q15057 778 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 FAM83EQ2M2I3 478 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 RNFT1Q5M7Z0 435 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 GRHL2Q6ISB3 625 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 MED27Q6P2C8 311 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 TRIM40Q6P9F5 258 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 RPS27LQ71UM5 84 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 GOLGA7Q7Z5G4 137 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ARMC10Q8N2F6 343 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 TMEM151AQ8N4L1 468 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ACOT4Q8N9L9 421 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 THAP3Q8WTV1 239 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 NSUN5Q96P11 429 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 UTP23Q9BRU9 249 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF717Q9BY31 904 aaPredicted RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 ABI3Q9P2A4 366 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 MTRF1LQ9UGC7 380 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 NFU1Q9UMS0 254 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 PPIEQ9UNP9 301 aaKnown RBP11.68□□□□□ -0.54
SMPD4-204ENST00000430682 RNF11Q9Y3C5 154 aa11.68□□□□□ -0.54
SMPD4-204ENST00000430682 EXPH5Q8NEV8 1989 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 TRBV11-1A0A0K0K1C0 115 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 A0A1B0GTL3 188 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 PRKRAO75569 313 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 SCELO95171 688 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 RASAL1O95294 804 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 STSP08842 583 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 FAM153BP0C7A2 387 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 GFAPP14136 432 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 ALDH18A1P54886 795 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 RPS13P62277 151 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 SLC13A2Q13183 592 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 DDX39BQ13838 428 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 GTF2H2Q13888 395 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 PCBP2Q15366 365 aaKnown RBP eCLIP11.67□□□□□ -0.543e-6■■■■□ 25.6
SMPD4-204ENST00000430682 INAQ16352 499 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 HIST2H2ACQ16777 129 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 FAM153CQ494X1 144 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 C4orf17Q53FE4 359 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 PAGE2BQ5JRK9 111 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 DEPDC1Q5TB30 811 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 C1QL3Q5VWW1 255 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 KHDRBS2Q5VWX1 349 aaKnown RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 HIST2H2AA3Q6FI13 130 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 GTF2H2CQ6P1K8 395 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 DGAT2L6Q6ZPD8 337 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 GALNTL5Q7Z4T8 443 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 ZNF595Q8IYB9 648 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 SLC5A8Q8N695 610 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 PTGR2Q8N8N7 351 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 MNS1Q8NEH6 495 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 B3GNT7Q8NFL0 401 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 HUS1BQ8NHY5 278 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 PTPMT1Q8WUK0 201 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 UCN3Q969E3 161 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 NCLNQ969V3 563 aa11.67□□□□□ -0.54
SMPD4-204ENST00000430682 ANKRD9Q96BM1 317 aaPredicted RBP11.67□□□□□ -0.54
SMPD4-204ENST00000430682 KCNC2Q96PR1 638 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms