RNA–Protein interactions for RNA: ENST00000430071.6

UBE3D-204, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 5

Gene UBE3D, Length 1,352 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-204ENST00000430071 CDK15Q96Q40 435 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 BARD1Q99728 777 aaKnown RBP15.95■□□□□ 0.14
UBE3D-204ENST00000430071 EFCAB11Q9BUY7 163 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 ACTR8Q9H981 624 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 ANKHQ9HCJ1 492 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 LANCL2Q9NS86 450 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 RNF11Q9Y3C5 154 aa15.95■□□□□ 0.14
UBE3D-204ENST00000430071 TMEM120BA0PK00 339 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 TM9SF1O15321 606 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 NDUFS4O43181 175 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 KLHL41O60662 606 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 SERPINA7P05543 415 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 ZNF888P0CJ79 500 aaPredicted RBP15.94■□□□□ 0.14
UBE3D-204ENST00000430071 C8orf89P0DMQ9 161 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 HNF4AP41235 474 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 CLCQ05315 142 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 ZNF169Q14929 603 aaPredicted RBP15.94■□□□□ 0.14
UBE3D-204ENST00000430071 RBBP5Q15291 538 aaKnown RBP15.94■□□□□ 0.14
UBE3D-204ENST00000430071 DEFB134Q4QY38 66 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 FHL5Q5TD97 284 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 IRAK1BP1Q5VVH5 260 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 LIPMQ5VYY2 423 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 FAM219BQ5XKK7 198 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 FCRLBQ6BAA4 426 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 ANKRD37Q7Z713 158 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP15.94■□□□□ 0.14
UBE3D-204ENST00000430071 L3MBTL4Q8NA19 623 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 TM9SF4Q92544 642 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 TSLPQ969D9 159 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 PKNOX2Q96KN3 472 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 NTMT1Q9BV86 223 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 GATA5Q9BWX5 397 aaPredicted RBP15.94■□□□□ 0.14
UBE3D-204ENST00000430071 NT5DC2Q9H857 520 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 ZFP69BQ9UJL9 534 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 ZNF225Q9UK10 706 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 SLC22A7Q9Y694 548 aa15.94■□□□□ 0.14
UBE3D-204ENST00000430071 CRYBG3Q68DQ2 2970 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 GALR3O60755 368 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-204ENST00000430071 AGFG2O95081 481 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 ZWINTO95229 277 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 BPGMP07738 259 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 SLC35G6P0C7Q6 338 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 DHRS4L1P0CG22 281 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 AHRP35869 848 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 SERPINB4P48594 390 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 CCNG1P51959 295 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 RHAGQ02094 409 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 LIPJQ5W064 366 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 GRHL2Q6ISB3 625 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 FRMD7Q6ZUT3 714 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 VN1R5Q7Z5H4 357 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 CPEB2Q7Z5Q1 589 aaKnown RBP15.93■□□□□ 0.14
UBE3D-204ENST00000430071 MYLK4Q86YV6 388 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-204ENST00000430071 KRT78Q8N1N4 520 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 TBC1D19Q8N5T2 526 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 ANKRD42Q8N9B4 389 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 GRHL3Q8TE85 626 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 UTP15Q8TED0 518 aaKnown RBP15.93■□□□□ 0.14
UBE3D-204ENST00000430071 ATP6V1E2Q96A05 226 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 VPS50Q96JG6 964 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 LMF1Q96S06 567 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 PITHD1Q9GZP4 211 aaPredicted RBP15.93■□□□□ 0.14
UBE3D-204ENST00000430071 EPS8L2Q9H6S3 715 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 RIC8BQ9NVN3 520 aa15.93■□□□□ 0.14
UBE3D-204ENST00000430071 UBFD1O14562 309 aaKnown RBP15.92■□□□□ 0.14
UBE3D-204ENST00000430071 CHST10O43529 356 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 MAN1A2O60476 641 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 UGDHO60701 494 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 TRIM13O60858 407 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 CLDN9O95484 217 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 OTCP00480 354 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 ALOX12P18054 663 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 RAB8AP61006 207 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 LAPTM5Q13571 262 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 PAGE2BQ5JRK9 111 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 LETMD1Q6P1Q0 360 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 LAS2Q8IYD9 372 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 OR7G3Q8NG95 312 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 OR4F6Q8NGB9 312 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 OR1N1Q8NGS0 311 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 NT5CQ8TCD5 201 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 CREB3L4Q8TEY5 395 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 ZNF382Q96SR6 550 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 NPAS2Q99743 824 aa15.92■□□□□ 0.14
UBE3D-204ENST00000430071 A0A0G2JN53 185 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 FAM227AF5H4B4 570 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 WISP2O76076 250 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 WDPCPO95876 746 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 TBX6O95947 436 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 SMIM10L1P0DMW3 83 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 ARL1P40616 181 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 TSFMP43897 325 aaKnown RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 WDR4P57081 412 aaKnown RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 BTG2P78543 158 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 LCP2Q13094 533 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 ZRSR2Q15696 482 aaKnown RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 CPSF6Q16630 551 aaKnown RBP eCLIP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 HIST2H2ACQ16777 129 aaPredicted RBP15.91■□□□□ 0.14
UBE3D-204ENST00000430071 CES4AQ5XG92 561 aa15.91■□□□□ 0.14
UBE3D-204ENST00000430071 HIST2H2AA3Q6FI13 130 aa15.91■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms