RNA–Protein interactions for RNA: ENST00000428868.1

SMC6-204, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 4

Gene SMC6, Length 544 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-204ENST00000428868 TMEM71Q6P5X7 295 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 WDR74Q6RFH5 385 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 HACD2Q6Y1H2 254 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PAGE2Q7Z2X7 111 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 CAMKMTQ7Z624 323 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 B3GNT8Q7Z7M8 397 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 HPS6Q86YV9 775 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TICAM1Q8IUC6 712 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PLXDC1Q8IUK5 500 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PARP9Q8IXQ6 854 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ULK2Q8IYT8 1036 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 CLEC4FQ8N1N0 589 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 C10orf111Q8N326 155 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ZCCHC7Q8N3Z6 543 aaKnown RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 D2HGDHQ8N465 521 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 DPP10Q8N608 796 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 FAM156AQ8NDB6 213 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM52Q8NDY8 209 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 FAM13CQ8NE31 585 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 OR6C4Q8NGE1 309 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 OR9A4Q8NGU2 314 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 OR1L3Q8NH93 324 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 DNAJB14Q8TBM8 379 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TSPEARQ8WU66 669 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 RERGQ96A58 199 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM125Q96AQ2 219 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 EXOSC8Q96B26 276 aaKnown RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 LRRC58Q96CX6 371 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 COQ8BQ96D53 544 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 AURKBQ96GD4 344 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 SLC41A2Q96JW4 573 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 CCDC74BQ96LY2 380 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 CDRT15Q96T59 188 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 DUSP26Q9BV47 211 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM121BQ9BXQ6 578 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 TRIM4Q9C037 500 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 EPB41L1Q9H4G0 881 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ZNF768Q9H5H4 540 aaKnown RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 COPS7BQ9H9Q2 264 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 PDE7BQ9NP56 450 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SEMA4GQ9NTN9 838 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 MRGBPQ9NV56 204 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM45AQ9NWC5 275 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 VAPAQ9P0L0 249 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SH3BP4Q9P0V3 963 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 ADAM29Q9UKF5 820 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 CROTQ9UKG9 612 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 PLCL2Q9UPR0 1127 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 MAN2B2Q9Y2E5 1009 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 TMEM184BQ9Y519 407 aaPredicted RBP8.41□□□□□ -1.06
SMC6-204ENST00000428868 PCDHGB2Q9Y5G2 931 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 SPTBN4Q9H254 2564 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 WDFY3Q8IZQ1 3526 aa8.41□□□□□ -1.06
SMC6-204ENST00000428868 DMXL1Q9Y485 3027 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SDK2Q58EX2 2172 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 A0A0A6YYC8 382 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 MYOCOSA0A1B0GUC4 107 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 CFAP73A6NFT4 308 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 C4orf47A7E2U8 309 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 I3L1I5 382 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 NTN3O00634 580 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 PGRMC2O15173 223 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 FLRT2O43155 660 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 GALR3O60755 368 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 CPSF4O95639 269 aaKnown RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 CPNE6O95741 557 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 LDOC1O95751 146 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 C6orf47O95873 294 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 IL6P05231 212 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 NELFEP18615 380 aaKnown RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 DDCP20711 480 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 GRK6P43250 576 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 KIR3DL1P43629 444 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ERFP50548 548 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 RASSF2P50749 326 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MNAT1P51948 309 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MTTPP55157 894 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 LIM2P55344 173 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MTPNP58546 118 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 HSD11B2P80365 405 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MAT1AQ00266 395 aaKnown RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 GAB1Q13480 694 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SQSTM1Q13501 440 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 MAPKAPK3Q16644 382 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SYT16Q17RD7 645 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 PIGGQ5H8A4 983 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 COQ5Q5HYK3 327 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ZC3H12BQ5HYM0 836 aaKnown RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 C6orf10Q5SRN2 563 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 CPTPQ5TA50 214 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 NDUFAF5Q5TEU4 345 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 PGM2L1Q6PCE3 622 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 C16orf89Q6UX73 402 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 BNC2Q6ZN30 1099 aaPredicted RBP8.4□□□□□ -1.06
SMC6-204ENST00000428868 IKBIPQ70UQ0 350 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 ARHGAP22Q7Z5H3 698 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 GPR180Q86V85 440 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 NAXDQ8IW45 347 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SLITRK4Q8IW52 837 aa8.4□□□□□ -1.06
SMC6-204ENST00000428868 SCUBE1Q8IWY4 988 aa8.4□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms