RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RGMAQ96B86 450 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 L3HYPDHQ96EM0 354 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 PEX11GQ96HA9 241 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 THOC3Q96J01 351 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 FRG2BQ96QU4 278 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF382Q96SR6 550 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ERVK-6Q9BXR3 956 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 AICDAQ9GZX7 198 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CLMPQ9H6B4 373 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 COPS7BQ9H9Q2 264 aaPredicted RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 ADAP2Q9NPF8 381 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SLAMF7Q9NQ25 335 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 DMRT3Q9NQL9 472 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 AGPAT4Q9NRZ5 378 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 LYARQ9NX58 379 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SIRT5Q9NXA8 310 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 AHSPQ9NZD4 102 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 VTI1BQ9UEU0 232 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 TRPS1Q9UHF7 1281 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 GRID1Q9ULK0 1009 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 WBP11Q9Y2W2 641 aaKnown RBP8.58□□□□□ -1.04
SMC1A-203ENST00000428014 CLDN16Q9Y5I7 305 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 FLNCQ14315 2725 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SHANK1Q9Y566 2161 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 SCN3AQ9NY46 2000 aa8.58□□□□□ -1.04
SMC1A-203ENST00000428014 PTPN13Q12923 2485 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 HIVEP3Q5T1R4 2406 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 POC1B-GALNT4F8VUJ3 575 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 K7EM74 188 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 GUCY1B2O75343 617 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SLU7O95391 586 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ENO1P06733 434 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SBK3P0C264 359 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 FAM153BP0C7A2 387 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 RHOXF2BP0C7M4 288 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 IMPDH1P20839 514 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ATP5A1P25705 553 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TLX1P31314 330 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 CRHR1P34998 444 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TNFSF10P50591 281 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 GPR143P51810 404 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 EFNA3P52797 238 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PRKAA2P54646 552 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 LIM2P55344 173 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PKNOX1P55347 436 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SLC26A5P58743 744 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 DNAJB13P59910 316 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TRA2BP62995 288 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 BTN3A2P78410 334 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 MAT1AQ00266 395 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 GALNT1Q10472 559 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TBL3Q12788 808 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TRAF3Q13114 568 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF169Q14929 603 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 MEP1AQ16819 746 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SYT16Q17RD7 645 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF800Q2TB10 664 aaPredicted RBP eCLIP8.57□□□□□ -1.049e-20■■■□□ 18.2
SMC1A-203ENST00000428014 FAM153CQ494X1 144 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 OR4C11Q6IEV9 310 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PAPD4Q6PIY7 484 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PAGE2Q7Z2X7 111 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PRICKLE2Q7Z3G6 844 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 UBE3DQ7Z6J8 389 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TMEM132CQ8N3T6 1108 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 METTL27Q8N6F8 245 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PTGR2Q8N8N7 351 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 GBP7Q8N8V2 638 aaPredicted RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ACOT4Q8N9L9 421 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 MORN4Q8NDC4 146 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 OR14A16Q8NHC5 309 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 HUS1BQ8NHY5 278 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ZCCHC10Q8TBK6 192 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ART5Q96L15 291 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 PTCHD1Q96NR3 888 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 RHOXF2Q9BQY4 288 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 TRMOQ9BU70 441 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 YIPF2Q9BWQ6 316 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ANKZF1Q9H8Y5 726 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ZNF160Q9HCG1 818 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SENP1Q9P0U3 644 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 HCN3Q9P1Z3 774 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 LGALS13Q9UHV8 139 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 SNX6Q9UNH7 406 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ASB1Q9Y576 335 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 ASH1LQ9NR48 2969 aaKnown RBP8.57□□□□□ -1.04
SMC1A-203ENST00000428014 DOPEY1Q5JWR5 2465 aa8.57□□□□□ -1.04
SMC1A-203ENST00000428014 USP9XQ93008 2570 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 OR5H15A6NDH6 313 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 TTLL8A6PVC2 850 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 A8MT66 165 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 C4orf51C9J302 202 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 OR7A17O14581 309 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SNUPNO95149 360 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 IFI6P09912 130 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 EEF1DP29692 281 aaKnown RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 SERPINB5P36952 375 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 BUD31P41223 144 aaPredicted RBP8.56□□□□□ -1.04
SMC1A-203ENST00000428014 GLRBP48167 497 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 CLCN2P51788 898 aa8.56□□□□□ -1.04
SMC1A-203ENST00000428014 CCNG1P51959 295 aa8.56□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms