RNA–Protein interactions for RNA: ENST00000427193.1

C9orf3-205, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-205ENST00000427193 RASSF2P50749 326 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 PMS2P54278 862 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 SLC37A1P57057 533 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 DCDC1P59894 354 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 POLR2LP62875 67 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 CRADDP78560 199 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 SARNPP82979 210 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 RAD51Q06609 339 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 CNTN1Q12860 1018 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 PEX6Q13608 980 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 GALNT3Q14435 633 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 HLTFQ14527 1009 aaKnown RBP eCLIP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 CRYMQ14894 314 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 TAF1AQ15573 450 aaPredicted RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ACCSLQ4AC99 568 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 DNAJC21Q5F1R6 531 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 EOGTQ5NDL2 527 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 Q5PR19 223 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 WASHC2DQ5SRD0 308 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ARMC12Q5T9G4 340 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 KIAA0930Q6ICG6 404 aaPredicted RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 USP43Q70EL4 1123 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 CENPUQ71F23 418 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ERN2Q76MJ5 926 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 NLRP9Q7RTR0 991 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 TSPAN33Q86UF1 283 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 TDRPQ86YL5 185 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 HDDC3Q8N4P3 179 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 FBXO36Q8NEA4 188 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 C7orf57Q8NEG2 295 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 RPLP0P6Q8NHW5 317 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 NPIPB3Q92617 1050 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 FAR2Q96K12 515 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 C9orf72Q96LT7 481 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ZDHHC6Q9H6R6 413 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 VIPAS39Q9H9C1 493 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 MAP6D1Q9H9H5 199 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 SAYSD1Q9NPB0 183 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ITM2CQ9NQX7 267 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 SMYD2Q9NRG4 433 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 NLE1Q9NVX2 485 aaPredicted RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 MTRF1LQ9UGC7 380 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 SLC2A6Q9UGQ3 507 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF711Q9Y462 761 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 FADS3Q9Y5Q0 445 aa5.3□□□□□ -1.56
C9orf3-205ENST00000427193 TLN1Q9Y490 2541 aaKnown RBP5.3□□□□□ -1.56
C9orf3-205ENST00000427193 CENPEQ02224 2701 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 IGLV3-16A0A075B6K0 115 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 A0A0U1RQS6 177 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 E7EVH7 732 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 MID1O15344 667 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 DHHO43323 396 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 TPD52L2O43399 206 aaKnown RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 WISP3O95389 354 aaPredicted RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 ALPIP09923 528 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 CD59P13987 128 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 NMBRP28336 390 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 TEAD1P28347 426 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SSTR1P30872 391 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 FOXN2P32314 431 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 CA5AP35218 305 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SPINT3P49223 89 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 NEK3P51956 506 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 ADARP55265 1226 aaKnown RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 CSHL1Q14406 222 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 PTPRCAPQ14761 206 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 POU6F1Q14863 301 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 TYSND1Q2T9J0 566 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SPANXN3Q5MJ09 141 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 HENMT1Q5T8I9 393 aaKnown RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 FAM46CQ5VWP2 391 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 LRRC66Q68CR7 880 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 ZNF776Q68DI1 518 aaPredicted RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 HMBOX1Q6NT76 420 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 NEK5Q6P3R8 708 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 C3orf62Q6ZUJ4 267 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SH2D5Q6ZV89 423 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 KDELC2Q7Z4H8 507 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 DSG4Q86SJ6 1040 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 GLRX5Q86SX6 157 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 MMAAQ8IVH4 418 aaKnown RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 ZBED8Q8IZ13 594 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SLC25A41Q8N5S1 370 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 GPR26Q8NDV2 337 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 LPCAT1Q8NF37 534 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 OR13C4Q8NGS5 318 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 GSDMBQ8TAX9 411 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 PYROXD1Q8WU10 500 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 STYXQ8WUJ0 223 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 STAMBPL1Q96FJ0 436 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 CDKN2AIPNLQ96HQ2 116 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 TTC25Q96NG3 672 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 KLF6Q99612 283 aaPredicted RBP5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SH3GL2Q99962 352 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 IL26Q9NPH9 171 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 SMOXQ9NWM0 555 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 VPS18Q9P253 973 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 CHMP2BQ9UQN3 213 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 ARL5AQ9Y689 179 aa5.29□□□□□ -1.56
C9orf3-205ENST00000427193 RPS6KL1Q9Y6S9 549 aa5.29□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms