RNA–Protein interactions for RNA: ENST00000427191.6

PTPN13-203, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN13, Length 8,487 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-203ENST00000427191 ADH1BP00325 375 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 FXYD6P3P58550 94 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PSPHP78330 225 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 SH3D19Q5HYK7 790 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PLEKHS1Q5SXH7 462 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 THAP4Q8WY91 577 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 BARD1Q99728 777 aaKnown RBP13.94□□□□□ -0.18
PTPN13-203ENST00000427191 DTLQ9NZJ0 730 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 PCDHGC4Q9Y5F7 938 aa13.94□□□□□ -0.18
PTPN13-203ENST00000427191 HCRTR2O43614 444 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PENKP01210 267 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 KLK1P06870 262 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GJB1P08034 283 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PITRM1Q5JRX3 1037 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TAC4Q86UU9 113 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MS4A15Q8N5U1 240 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 OR56B2PQ8NGI1 322 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 SNAPC3Q92966 411 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GJE1A6NN92 205 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TSPAN15O95858 294 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 VARS2Q5ST30 1063 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 ENDOVQ8N8Q3 282 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 DCBLD1Q8N8Z6 715 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 FAM156AQ8NDB6 213 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GPR22Q99680 433 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PIP5K1AQ99755 562 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 NME7Q9Y5B8 376 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TRAV6A0A075B6T7 132 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 CREB5Q02930 508 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 UNC5DQ6UXZ4 953 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MMAAQ8IVH4 418 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PCDHAC1Q9H158 963 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 A0A096LPI6 279 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GPR89AB7ZAQ6 455 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 NPIPA2E9PIF3 369 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 NPIPA3F8WFD2 350 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MANBAO00462 879 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GPR89BP0CG08 455 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PDGFRLQ15198 375 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 KAZALD1Q96I82 304 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 NAA11Q9BSU3 229 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 GPATCH2Q9NW75 528 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 FCF1Q9Y324 198 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MAFBQ9Y5Q3 323 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 SLC16A5O15375 505 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 IRF2P14316 349 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 OC90Q02509 493 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MLLT1Q03111 559 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 IL17AQ16552 155 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 ADGRF1Q5T601 910 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TMIGD1Q6UXZ0 262 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 VTCN1Q7Z7D3 282 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 NAT8LQ8N9F0 302 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PYCR2Q96C36 320 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 C11orf84Q9BUA3 381 aaPredicted RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 POLDIP3Q9BY77 421 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 DUSP11O75319 330 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 CTHP32929 405 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 PITPNBP48739 271 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 MZT1Q08AG7 82 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 ITPRIPL2Q3MIP1 535 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 ATAD3CQ5T2N8 411 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 DNAJC22Q8N4W6 341 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TRUB1Q8WWH5 349 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 DLG5Q8TDM6 1919 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TVP23AA6NH52 213 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 SOCS5O75159 536 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 FCER2P06734 321 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 RHCEP18577 417 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 CAMLGP49069 296 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 ARSFP54793 590 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 TRAM1L1Q8N609 369 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 SLC7A13Q8TCU3 470 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 CNN2Q99439 309 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 LRFN1Q9P244 771 aa13.93□□□□□ -0.18
PTPN13-203ENST00000427191 CNOT11Q9UKZ1 510 aaKnown RBP13.93□□□□□ -0.18
PTPN13-203ENST00000427191 FAM230AA0A1W2PPH8 454 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 IRF6O14896 467 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 PRAF2O60831 178 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RRAS2P62070 204 aaPredicted RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 MADCAM1Q13477 382 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RIN1Q13671 783 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 AKR1C8PQ5T2L2 129 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RGMBQ6NW40 437 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 TMPPEQ6ZT21 453 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF366Q8N895 744 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 GALNT11Q8NCW6 608 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 CASTOR1Q8WTX7 329 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 TRMT61BQ9BVS5 477 aaKnown RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ETFAP13804 333 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ITGB5P18084 799 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 RTL6Q6ICC9 239 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF783Q6ZMS7 281 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 C1orf52Q8N6N3 182 aaKnown RBP13.92□□□□□ -0.18
PTPN13-203ENST00000427191 GDPD1Q8N9F7 314 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 C1orf127Q8N9H9 656 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 GPR152Q8TDT2 470 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 ZNF382Q96SR6 550 aa13.92□□□□□ -0.18
PTPN13-203ENST00000427191 BIN3Q9NQY0 253 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms