RNA–Protein interactions for RNA: ENST00000425815.5

SMARCAL1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-205ENST00000425815 IKBKGQ9Y6K9 419 aa17.15■□□□□ 0.34
SMARCAL1-205ENST00000425815 MYOCOSA0A1B0GUC4 107 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 CTNSO60931 367 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 SCELO95171 688 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 UQCRHP07919 91 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 SNRPAP09012 282 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 COL6A2P12110 1019 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 HIST1H1TP22492 207 aaPredicted RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 EEF1DP29692 281 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 PIK3CBP42338 1070 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 KHDRBS2Q5VWX1 349 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 SPINK14Q6IE38 97 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 METTL2BQ6P1Q9 378 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 TIFABQ6ZNK6 161 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 TRMT10CQ7L0Y3 403 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 CLNKQ7Z7G1 428 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF595Q8IYB9 648 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 MDS2Q8NDY4 140 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 CMTM7Q96FZ5 175 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 NSUN5Q96P11 429 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 SLX1AQ9BQ83 275 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZBTB26Q9HCK0 441 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 LYRM4Q9HD34 91 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 XPR1Q9UBH6 696 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF223Q9UK11 482 aaPredicted RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 PPIEQ9UNP9 301 aaKnown RBP17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 ANGPTL3Q9Y5C1 460 aa17.14■□□□□ 0.33
SMARCAL1-205ENST00000425815 BLACEA4D250 179 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 H0YIV9 168 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 CLDN4O14493 209 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 MYO1DO94832 1006 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 SERPINB1P30740 379 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 TDGF1P3P51864 188 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 TGM3Q08188 693 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 OR4C11Q6IEV9 310 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 CHSY3Q70JA7 882 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 RPS19BP1Q86WX3 136 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 LGI4Q8N135 537 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ARMC10Q8N2F6 343 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 SLC5A8Q8N695 610 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 BCORP1Q8N888 145 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 SRFBP1Q8NEF9 429 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ARMC2Q8NEN0 867 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 OR52B6Q8NGF0 335 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 WDR20Q8TBZ3 569 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ADAMTS18Q8TE60 1221 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 CDK15Q96Q40 435 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 MTERF1Q99551 399 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF717Q9BY31 904 aaPredicted RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 HES7Q9BYE0 225 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 NOL11Q9H8H0 719 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ACTR8Q9H981 624 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 DMRT3Q9NQL9 472 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 PNO1Q9NRX1 252 aaKnown RBP17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 ADGRE2Q9UHX3 823 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 PCDHGA11Q9Y5H2 935 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 CNTRLQ7Z7A1 2325 aa17.13■□□□□ 0.33
SMARCAL1-205ENST00000425815 A0A1B0GTL3 188 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 EXOC1LA0A1B0GW35 172 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 WIPF3A6NGB9 483 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 GABRR3A8MPY1 467 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 STX16-NPEPL1H3BU86 382 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 STX16O14662 325 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 UGDHO60701 494 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 NEURL1O76050 574 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 AGFG2O95081 481 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ETHE1O95571 254 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 MYBL2P10244 700 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 EDN3P14138 238 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 MST1P26927 711 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 TPP2P29144 1249 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 NEK2P51955 445 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 MLF1P58340 268 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 RPS13P62277 151 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 SLC13A2Q13183 592 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 DDX39BQ13838 428 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 SLC29A2Q14542 456 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 OR1C1Q15619 314 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 INAQ16352 499 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 CPSF6Q16630 551 aaKnown RBP eCLIP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 TSNAXIP1Q2TAA8 658 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF766Q5HY98 468 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 FAM180AQ6UWF9 173 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 RPS27LQ71UM5 84 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 TAOK1Q7L7X3 1001 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ZNF227Q86WZ6 799 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 MYLK4Q86YV6 388 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 GSPT2Q8IYD1 628 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 B3GNT7Q8NFL0 401 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ANKRD9Q96BM1 317 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 SCYL1Q96KG9 808 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 MRPL57Q9BQC6 102 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 UTP23Q9BRU9 249 aaKnown RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ROGDIQ9GZN7 287 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 L2HGDHQ9H9P8 463 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 COPS7BQ9H9Q2 264 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 ERRFI1Q9UJM3 462 aaPredicted RBP17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 PCTPQ9UKL6 214 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 LRRK2Q5S007 2527 aa17.12■□□□□ 0.33
SMARCAL1-205ENST00000425815 TMEM200CA6NKL6 621 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms