RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 LMO7DNF2Z398 122 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 H0YHG0 523 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 RECQL5O94762 991 aaPredicted RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 MT-ND2P03891 347 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 TPM3P06753 285 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 ABCB1P08183 1280 aaPredicted RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 NEFHP12036 1026 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 AZGP1P25311 298 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 CTNNA2P26232 953 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 CHMLP26374 656 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 CALRP27797 417 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 MDH2P40926 338 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 ADARP55265 1226 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 SARNPP82979 210 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 IL11RAQ14626 422 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 KIAA0040Q15053 153 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 LIPJQ5W064 366 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 REP15Q6BDI9 236 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 PIGWQ7Z7B1 504 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 AMIGO1Q86WK6 493 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 ANKRD13CQ8N6S4 541 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 TC2NQ8N9U0 490 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 BEST4Q8NFU0 473 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 SNX21Q969T3 373 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 ZBED6CLQ96FA7 236 aaPredicted RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 GDAP1L1Q96MZ0 367 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 PAIP2Q9BPZ3 127 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 PINK1Q9BXM7 581 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 MAF1Q9H063 256 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 PLEKHA3Q9HB20 300 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 KCNMB3Q9NPA1 279 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 CPSF2Q9P2I0 782 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 VPS28Q9UK41 221 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 SATB2Q9UPW6 733 aa2.98□□□□□ -1.93
LINC01040-201ENST00000425048 RRP15Q9Y3B9 282 aaKnown RBP2.98□□□□□ -1.93
LINC01040-201ENST00000425048 THOC2Q8NI27 1593 aaKnown RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 MIA2Q96PC5 1412 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 FOXI3A8MTJ6 420 aaPredicted RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 H3BMM5 538 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 TSC22D2O75157 780 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 HSPA5P11021 654 aaKnown RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 MAGEA8P43361 318 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 MAGEA9P43362 315 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 WNT4P56705 351 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 SULT2A1Q06520 285 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 STK4Q13043 487 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 TTC19Q6DKK2 380 aaPredicted RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 C4orf50Q6ZRC1 276 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 CENPVQ7Z7K6 275 aaPredicted RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 TBC1D10CQ8IV04 446 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 ANKRD20A12PQ8NF67 263 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 ZNF397Q8NF99 534 aaPredicted RBP2.97□□□□□ -1.93
LINC01040-201ENST00000425048 AGTPBP1Q9UPW5 1226 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 TMEM5Q9Y2B1 443 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 TRIOBPQ9H2D6 2365 aa2.97□□□□□ -1.93
LINC01040-201ENST00000425048 YEATS2Q9ULM3 1422 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 CFAP43Q8NDM7 1665 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ZNF487B1APH4 448 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 KINO60870 393 aaKnown RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 P0C879 139 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ALOX12P18054 663 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ABRAXAS2Q15018 415 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 LRRC37A5PQ49AS3 106 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 SUSD4Q5VX71 490 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 NUFIP2Q7Z417 695 aaKnown RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 COX8CQ7Z4L0 72 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 TLK2Q86UE8 772 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ENTHD1Q8IYW4 607 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 CCDC191Q8NCU4 936 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 NEK11Q8NG66 645 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 CCDC26Q8TAB7 109 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 RNF138Q8WVD3 245 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 LRRC3BQ96PB8 259 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ABHD1Q96SE0 405 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 SNX25Q9H3E2 840 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ZSCAN16Q9H4T2 348 aaPredicted RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 SUDS3Q9H7L9 328 aaPredicted RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 UBQLN2Q9UHD9 624 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ABCG2Q9UNQ0 655 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 HBS1LQ9Y450 684 aaKnown RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 ARID1AO14497 2285 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 INSRP06213 1382 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 EIF3AQ14152 1382 aaKnown RBP2.96□□□□□ -1.94
LINC01040-201ENST00000425048 HECW1Q76N89 1606 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 PLEKHH2Q8IVE3 1493 aa2.96□□□□□ -1.94
LINC01040-201ENST00000425048 WIZO95785 1651 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 BLMP54132 1417 aaPredicted RBP2.95□□□□□ -1.94
LINC01040-201ENST00000425048 SPATA31E1Q6ZUB1 1445 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 CLASP1Q7Z460 1538 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 hCG_1809904A0A1W2PP81 198 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 A0A1W2PPE2 198 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 A0A1W2PR64 198 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 LRRTM2O43300 516 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 RTN2O75298 545 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 ANGPTL1O95841 491 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 ALOX5P09917 674 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 EPORP19235 508 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 GDF1P27539 372 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 SLC1A6P48664 564 aa2.95□□□□□ -1.94
LINC01040-201ENST00000425048 FNTAP49354 379 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms