RNA–Protein interactions for RNA: ENST00000424143.5

C9orf3-204, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 1,605 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-204ENST00000424143 OR8H2Q8N162 312 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 LINC00471Q8N535 108 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 AQP11Q8NBQ7 271 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 OR9Q2Q8NGE9 314 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 OR8J1Q8NGP2 316 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 HUS1BQ8NHY5 278 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SKA2Q8WVK7 121 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 ELMO1Q92556 727 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PDXPQ96GD0 296 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TEFMQ96QE5 360 aaKnown RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PHOX2BQ99453 314 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RMI1Q9H9A7 625 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 NMNAT1Q9HAN9 279 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 MRPS18AQ9NVS2 196 aaKnown RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SNX7Q9UNH6 387 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SSR3Q9UNL2 185 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CMAHPQ9Y471 501 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 KCNE2Q9Y6J6 123 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PRAMEF33A0A0G2JMD5 474 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TRBC2A0A5B9 178 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SLC5A10A0PJK1 596 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 IRGMA1A4Y4 181 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 MEIOCA2RUB1 952 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 A8MU76 341 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 FAAHO00519 579 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 NPC1O15118 1278 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PRAMEF10O60809 474 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 ALX3O95076 343 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 GASTP01350 101 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 YES1P07947 543 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CYP2A6P11509 494 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 UQCRC2P22695 453 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 AQP1P29972 269 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 NKX2-5P52952 324 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 COX10Q12887 443 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PLD1Q13393 1074 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 NAE1Q13564 534 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 LARS2Q15031 903 aaKnown RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 CARTPTQ16568 116 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 NDUFA9Q16795 377 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF385BQ569K4 471 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 KIAA1841Q6NSI8 718 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 KIAA1211LQ6NV74 962 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 METAP1DQ6UB28 335 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SPATC1Q76KD6 591 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RAVER1Q8IY67 606 aaKnown RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RNF175Q8N4F7 328 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 FAM26EQ8N5C1 309 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TRAM1L1Q8N609 369 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PSD4Q8NDX1 1056 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 BCL7CQ8WUZ0 217 aaPredicted RBP14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SLC7A6Q92536 515 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SLC25A46Q96AG3 418 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 RNF170Q96K19 258 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 SAMD11Q96NU1 681 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 VPS35Q96QK1 796 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 OR4K3Q96R72 315 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 BARHL1Q9BZE3 327 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 A4GALTQ9NPC4 353 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 ERVK13-1Q9NX77 482 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 MUTYHQ9UIF7 546 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 LRFN2Q9ULH4 789 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 TMCC3Q9ULS5 477 aa14.55□□□□□ -0.08
C9orf3-204ENST00000424143 PLXNA2O75051 1894 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 NT5C1B-RDH14C9J2C7 533 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 STK25O00506 426 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 TPST2O60704 377 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 PDE9AO76083 593 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 RECKO95980 971 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 ADRA2AP08913 450 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 CCND3P30281 292 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 GKP32189 559 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 WDR5P61964 334 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 C1DQ13901 141 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF79Q15937 498 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 MFSD4BQ5TF39 518 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 REEP3Q6NUK4 255 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 TCTE3Q8IZS6 198 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 VWA5B2Q8N398 1253 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 TTC16Q8NEE8 873 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 UBE2E3Q969T4 207 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 PPCDCQ96CD2 204 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 ZC3HAV1LQ96H79 300 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 ZNF764Q96H86 408 aaPredicted RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 WRAP53Q9BUR4 548 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 BBS2Q9BXC9 721 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 GON7Q9BXV9 100 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 EPHX3Q9H6B9 360 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 ACAD8Q9UKU7 415 aa14.54□□□□□ -0.08
C9orf3-204ENST00000424143 DIMT1Q9UNQ2 313 aaKnown RBP14.54□□□□□ -0.08
C9orf3-204ENST00000424143 GNG14A0A1W2PPG7 69 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 TSPAN11A1L157 253 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 IQCJ-SCHIP1C9J366 451 aaPredicted RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 PITPNM1O00562 1244 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 ENTPD6O75354 484 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 CSO75390 466 aaKnown RBP14.53□□□□□ -0.08
C9orf3-204ENST00000424143 C6orf47O95873 294 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 HLA-DQB1P01920 261 aa14.53□□□□□ -0.08
C9orf3-204ENST00000424143 CPEP16870 476 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms