RNA–Protein interactions for RNA: ENST00000421887.2

SFXN1-202, Transcript of sideroflexin 1, humanhuman

TSL 4

Gene SFXN1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-202ENST00000421887 PDFQ9HBH1 243 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 MRM3Q9HC36 420 aaKnown RBP4.62□□□□□ -1.67
SFXN1-202ENST00000421887 GLOD4Q9HC38 313 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 SACM1LQ9NTJ5 587 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 PKD2L2Q9NZM6 624 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 ATXN10Q9UBB4 475 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 PCYT1BQ9Y5K3 369 aaPredicted RBP4.62□□□□□ -1.67
SFXN1-202ENST00000421887 AP1M2Q9Y6Q5 423 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 AKAP9Q99996 3911 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 COL6A5A8TX70 2615 aa4.62□□□□□ -1.67
SFXN1-202ENST00000421887 FAM170AA1A519 330 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 GSAPA4D1B5 854 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 NKX2-6A6NCS4 301 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 OR6C74A6NCV1 312 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 IFITM10A6NMD0 228 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 KRTAP9-6A8MVA2 160 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 INAFM1C9JVW0 142 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 F8W8V4 182 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 SOCS6O14544 535 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 ARHGEF9O43307 516 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 CTAG2O75638 210 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 OR2B3O76000 313 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PGLSO95336 258 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 RAF1P04049 648 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 HOXD4P09016 255 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PIM1P11309 404 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF8P17098 575 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 IGFBP2P18065 325 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 EEF1GP26641 437 aaKnown RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 GABRB2P47870 512 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PAPOLAP51003 745 aaKnown RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 TPTEP56180 551 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 LRRC63Q05C16 580 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 IL10RBQ08334 325 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 XRCC4Q13426 336 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 KRT33BQ14525 404 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 RBBP7Q16576 425 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 C15orf59Q2T9L4 293 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 DEFB113Q30KQ7 82 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 SHEQ5VZ18 495 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 TMEM211Q6ICI0 200 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 MZT2AQ6P582 158 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PODNL1Q6PEZ8 512 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 GSG1LQ6UXU4 331 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 WASH2PQ6VEQ5 465 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 C3P1Q6ZMU1 363 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 C16orf47Q6ZP98 133 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 Q6ZPB1 254 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 RFLNAQ6ZTI6 216 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 NCCRP1Q6ZVX7 275 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 ARCQ7LC44 396 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 STRADAQ7RTN6 431 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 BNIPLQ7Z465 357 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 MAATS1Q7Z4T9 603 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 TRAPPC5Q8IUR0 188 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PHC2Q8IXK0 858 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 SLC15A3Q8IY34 581 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 CCDC185Q8N715 623 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 EMC1Q8N766 993 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 RNF152Q8N8N0 203 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 OSR1Q8TAX0 266 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 HAS2Q92819 552 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 IQCDQ96DY2 449 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 TTC25Q96NG3 672 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PSKH2Q96QS6 385 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 MCCC1Q96RQ3 725 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 NUDCD1Q96RS6 583 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 GPATCH1Q9BRR8 931 aaKnown RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 TIMM29Q9BSF4 260 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 SPATA16Q9BXB7 569 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 FAM83DQ9H4H8 585 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 FAM207AQ9NSI2 230 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 IMP3Q9NV31 184 aaKnown RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 RMND1Q9NWS8 449 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 CAMSAP3Q9P1Y5 1249 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 LRFN1Q9P244 771 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 PCDHA7Q9UN72 937 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 NEU3Q9UQ49 428 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 HS3ST3B1Q9Y662 390 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 NBEAL1Q6ZS30 2694 aa4.61□□□□□ -1.67
SFXN1-202ENST00000421887 ZNF469Q96JG9 3925 aaPredicted RBP4.61□□□□□ -1.67
SFXN1-202ENST00000421887 CPAMD8Q8IZJ3 1885 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 HIVEP2P31629 2446 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 C1orf232A0A0U1RR37 186 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 A0A1B0GVL5 298 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 NPIPA5E9PKD4 350 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 F2RL2O00254 374 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 CHUKO15111 745 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 TTI1O43156 1089 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 CDK14O94921 469 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 CLDN7O95471 211 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 F10P00742 488 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 UMODP07911 640 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 DHRS4L1P0CG22 281 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 PFKFB1P16118 471 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 POLR2CP19387 275 aaPredicted RBP4.6□□□□□ -1.67
SFXN1-202ENST00000421887 HLA-DPA1P20036 260 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 CA4P22748 312 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 CHRNB4P30926 498 aa4.6□□□□□ -1.67
SFXN1-202ENST00000421887 RFC1P35251 1148 aaPredicted RBP4.6□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms