RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 TIMM22Q9Y584 194 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 SCN3AQ9NY46 2000 aa21.75■■□□□ 1.07
SMARCB1-205ENST00000417137 LOC102723996A0A087X1L8 192 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 BLACEA4D250 179 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 FAM227AF5H4B4 570 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 MKRN2OSH3BPM6 223 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 ATXN7O15265 892 aaPredicted RBP21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 KLHL41O60662 606 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 ETHE1O95571 254 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 HPP00738 406 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 UROSP10746 265 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 BSGP35613 385 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 MAGOHP61326 146 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 RHAGQ02094 409 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 GALNT1Q10472 559 aaPredicted RBP21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 AIMP2Q13155 320 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 ABRAXAS2Q15018 415 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 CYP20A1Q6UW02 462 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 QSOX2Q6ZRP7 698 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 NUDT13Q86X67 352 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 ZNF595Q8IYB9 648 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 TLCD1Q96CP7 247 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 PTCHD1Q96NR3 888 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 PRDM9Q9NQV7 894 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 LYARQ9NX58 379 aaKnown RBP21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 KCMF1Q9P0J7 381 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 VPS29Q9UBQ0 182 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 PHF11Q9UIL8 331 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 ADAM29Q9UKF5 820 aa21.74■■□□□ 1.07
SMARCB1-205ENST00000417137 NSG1A0A0A6YYJ2 146 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 ARHGAP10A1A4S6 786 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SERTM1A2A2V5 107 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SYNDIG1LA6NDD5 238 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 FAM87AP0C7U9 286 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 NEFHP12036 1026 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 TLX1P31314 330 aaPredicted RBP21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SLC18A1P54219 525 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 HSD17B7P56937 341 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 KCNAB2Q13303 367 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 CPZQ66K79 652 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 CPEB2Q7Z5Q1 589 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 CUZD1Q86UP6 607 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 GPR180Q86V85 440 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SHISA5Q8N114 240 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 C7orf57Q8NEG2 295 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 C8orf44Q96CB5 159 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 KCNA7Q96RP8 456 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 MAPKAP1Q9BPZ7 522 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SORBS1Q9BX66 1292 aaKnown RBP21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 SHCBP1LQ9BZQ2 653 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 FBXW2Q9UKT8 454 aa21.73■■□□□ 1.07
SMARCB1-205ENST00000417137 A0A1W2PQ72 361 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 OR2W5A6NFC9 320 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 CYR61O00622 381 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 CHEK2O96017 543 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 ICAM2P13598 275 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 CPN2P22792 545 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 ACTN3Q08043 901 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 CHAF1BQ13112 559 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 ARL13AQ5H913 290 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 TCHHL1Q5QJ38 904 aaPredicted RBP21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 HHATQ5VTY9 493 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 ANKRD37Q7Z713 158 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 METTL4Q8N3J2 472 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 FAM47BQ8NA70 645 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 MRPL1Q9BYD6 325 aaKnown RBP21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 TRIM55Q9BYV6 548 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 ZNF700Q9H0M5 742 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 PRTFDC1Q9NRG1 225 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 RIC8BQ9NVN3 520 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 NKIRAS1Q9NYS0 192 aa21.72■■□□□ 1.07
SMARCB1-205ENST00000417137 IGHV1-45A0A0A0MS14 117 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 A0A0A6YYD5 115 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 TMEM120BA0PK00 339 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 WDR91A4D1P6 747 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 AZIN1O14977 448 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 DHRS4L1P0CG22 281 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 COX6A1P12074 109 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 SOX8P57073 446 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 AP2B1P63010 937 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 BTG2P78543 158 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 EEF1A2Q05639 463 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 SLC13A2Q13183 592 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 MPP2Q14168 576 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 IRAK1BP1Q5VVH5 260 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 ZCCHC23Q6ZST2 131 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 EFCAB3Q8N7B9 438 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 ANKRD42Q8N9B4 389 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 HBEGFQ99075 208 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 PAIP2Q9BPZ3 127 aaKnown RBP21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 TUBB6Q9BUF5 446 aa21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 ZNF717Q9BY31 904 aaPredicted RBP21.71■■□□□ 1.07
SMARCB1-205ENST00000417137 CTNSO60931 367 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 GUCY1B2O75343 617 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 EEDO75530 441 aaKnown RBP21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 DNAJB5O75953 348 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 KLK1P06870 262 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 FGF4P08620 206 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 FAM58BPP0C7Q3 252 aa21.7■■□□□ 1.06
SMARCB1-205ENST00000417137 BUD31P41223 144 aaPredicted RBP21.7■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms