RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 CSF3RQ99062 836 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 VKORC1Q9BQB6 163 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 COPS7BQ9H9Q2 264 aaPredicted RBP20.3■□□□□ 0.84
ACTB-203ENST00000417101 ADAP2Q9NPF8 381 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 CD274Q9NZQ7 290 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 RNF14Q9UBS8 474 aa20.3■□□□□ 0.84
ACTB-203ENST00000417101 CYR61O00622 381 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 ADAM10O14672 748 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 HS6ST1O60243 411 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 PRKNO60260 465 aaPredicted RBP20.29■□□□□ 0.84
ACTB-203ENST00000417101 ZFAND5O76080 213 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 STMN1P16949 149 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 SSR4P51571 173 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 MTTPP55157 894 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 GPR85P60893 370 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 ATP6V0D1P61421 351 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 CALCOCO2Q13137 446 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 PDK4Q16654 411 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 CDKL4Q5MAI5 379 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 SREK1Q8WXA9 508 aaKnown RBP20.29■□□□□ 0.84
ACTB-203ENST00000417101 F2RL3Q96RI0 385 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 DMRTA2Q96SC8 542 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 GPR22Q99680 433 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 RBBP8Q99708 897 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 CPNE1Q99829 537 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 ERP44Q9BS26 406 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 TRIM8Q9BZR9 551 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 LIN28AQ9H9Z2 209 aaKnown RBP20.29■□□□□ 0.84
ACTB-203ENST00000417101 PPT2Q9UMR5 302 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 DAPP1Q9UN19 280 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 ERVK-11Q9UQG0 969 aa20.29■□□□□ 0.84
ACTB-203ENST00000417101 YARS2Q9Y2Z4 477 aaKnown RBP20.29■□□□□ 0.84
ACTB-203ENST00000417101 A0A1B0GTH9 108 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 MYOCOSA0A1B0GUC4 107 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 TCRBV9S1A1TA0A576 114 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 FANCGO15287 622 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 CDC40O60508 579 aaKnown RBP eCLIP20.28■□□□□ 0.84
ACTB-203ENST00000417101 IFNA16P05015 189 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 TFEBP19484 476 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 CD22P20273 847 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 PTGS2P35354 604 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 BMPR2Q13873 1038 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 RCN2Q14257 317 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 ELAVL1Q15717 326 aaKnown RBP20.28■□□□□ 0.84
ACTB-203ENST00000417101 CMPK2Q5EBM0 449 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 TMEM132CQ8N3T6 1108 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 C16orf52Q8NHV5 167 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 PHF10Q8WUB8 498 aaKnown RBP20.28■□□□□ 0.84
ACTB-203ENST00000417101 EXT2Q93063 718 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 WDR34Q96EX3 536 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 PTCD3Q96EY7 689 aaKnown RBP20.28■□□□□ 0.84
ACTB-203ENST00000417101 EFCAB11Q9BUY7 163 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 TIMMDC1Q9NPL8 285 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 KCMF1Q9P0J7 381 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 WHRNQ9P202 907 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 PTBP2Q9UKA9 531 aaKnown RBP20.28■□□□□ 0.84
ACTB-203ENST00000417101 CLCA3PQ9Y6N3 262 aa20.28■□□□□ 0.84
ACTB-203ENST00000417101 CACNA1CQ13936 2221 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 POLQO75417 2590 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 TMEM200CA6NKL6 621 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 CCNT2O60583 730 aaKnown RBP20.27■□□□□ 0.84
ACTB-203ENST00000417101 CTNSO60931 367 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 OR2J2O76002 312 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 TPOP07202 933 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 GP5P40197 560 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 KIR3DL1P43629 444 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 IRF8Q02556 426 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 TGM3Q08188 693 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 C3orf62Q6ZUJ4 267 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 EID3Q8N140 333 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 ZFP62Q8NB50 900 aaPredicted RBP20.27■□□□□ 0.84
ACTB-203ENST00000417101 PDPRQ8NCN5 879 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 LURAP1Q96LR2 239 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 PRM3Q9NNZ6 103 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 PRDM7Q9NQW5 492 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 RNF112Q9ULX5 631 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 PYCARDQ9ULZ3 195 aa20.27■□□□□ 0.84
ACTB-203ENST00000417101 AKAP9Q99996 3911 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 FAM187AA6NFU0 413 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 FAM159BA6NKW6 160 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 A8MVJ9 347 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 EIF3HO15372 352 aaKnown RBP eCLIP20.26■□□□□ 0.83
ACTB-203ENST00000417101 S100BP04271 92 aaPredicted RBP20.26■□□□□ 0.83
ACTB-203ENST00000417101 TUBB4AP04350 444 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 EPORP19235 508 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 GMPRP36959 345 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 KCNC1P48547 511 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 RAB10P61026 200 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 STX4Q12846 297 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 CHIT1Q13231 466 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 LAPTM5Q13571 262 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 EFTUD2Q15029 972 aaKnown RBP eCLIP20.26■□□□□ 0.834e-36■■■■■ 42.3
ACTB-203ENST00000417101 ZKSCAN8Q15776 578 aaPredicted RBP20.26■□□□□ 0.83
ACTB-203ENST00000417101 HIST2H2ACQ16777 129 aaPredicted RBP20.26■□□□□ 0.83
ACTB-203ENST00000417101 PAGE2BQ5JRK9 111 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 HIST2H2AA3Q6FI13 130 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 CD163Q86VB7 1156 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 CTAGE3PQ8IX95 158 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 ZNF295-AS1Q8N0V1 137 aa20.26■□□□□ 0.83
ACTB-203ENST00000417101 FAM57AQ8TBR7 257 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 44.4 ms