RNA–Protein interactions for RNA: ENST00000415148.6

CD44-206, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 2,369 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-206ENST00000415148 MYNNQ9NPC7 610 aa9.37□□□□□ -0.91
CD44-206ENST00000415148 TAS2R9Q9NYW1 312 aa9.37□□□□□ -0.91
CD44-206ENST00000415148 ENPP4Q9Y6X5 453 aa9.37□□□□□ -0.91
CD44-206ENST00000415148 FAM227AF5H4B4 570 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ZW10O43264 779 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 IDH3BO43837 385 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 BNIP3LO60238 219 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ATG13O75143 517 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 GPX5O75715 221 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 MFN2O95140 757 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CXCL10P02778 98 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CKMP06732 381 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ARAFP10398 606 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 AZGP1P25311 298 aaKnown RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 GABRR2P28476 465 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 HLA-FP30511 346 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CRISP1P54107 249 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 OR2B6P58173 313 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CAP1Q01518 475 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 RHAGQ02094 409 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SSX1Q16384 188 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TSTQ16762 297 aaKnown RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 HENMT1Q5T8I9 393 aaKnown RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 MEDAGQ5VYS4 303 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 RNLSQ5VYX0 342 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 HIST2H2AA3Q6FI13 130 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FRMPD2BQ6IN97 320 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 HSD11B1LQ7Z5J1 315 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ATCAYQ86WG3 371 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 KRT73Q86Y46 540 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.36□□□□□ -0.91
CD44-206ENST00000415148 ZNF557Q8N988 423 aaPredicted RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 FAM46DQ8NEK8 389 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SETD6Q8TBK2 473 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PXYLP1Q8TE99 480 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PPCDCQ96CD2 204 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ST6GAL2Q96JF0 529 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 OR2A14Q96R47 310 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TTYH2Q9BSA4 534 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 EFCAB11Q9BUY7 163 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TAPBPLQ9BX59 468 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 NUAK2Q9H093 628 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 EPHX3Q9H6B9 360 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FZD3Q9NPG1 666 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FTSJ1Q9UET6 329 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SRRDQ9UH36 339 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ANGPT4Q9Y264 503 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PLXNA2O75051 1894 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TRAV19A0A0A6YYK7 116 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CARNS1A5YM72 827 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PDZK1P1A8MUH7 402 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FADS2P1A8MWK0 482 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 CACNB4O00305 520 aaPredicted RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 ARHGAP33O14559 1287 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PCDH17O14917 1159 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 MTX2O75431 263 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 C6orf47O95873 294 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SLC16A8O95907 504 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 RB1P06400 928 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PRLHRP49683 370 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SNRPGP62308 76 aaKnown RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 SP3Q02447 781 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 DMC1Q14565 340 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 NCF4Q15080 339 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 BAK1Q16611 211 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FAM71E1Q6IPT2 247 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 KLHL17Q6TDP4 642 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ANGPTL8Q6UXH0 198 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 PTCHD4Q6ZW05 846 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 LSRQ86X29 649 aaPredicted RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 UBQLNLQ8IYU4 475 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 IL17RCQ8NAC3 791 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ST13P5Q8NFI4 369 aaPredicted RBP9.36□□□□□ -0.91
CD44-206ENST00000415148 GPR156Q8NFN8 814 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 NEIL2Q969S2 332 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 FAM129BQ96TA1 746 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 SLC25A19Q9HC21 320 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TBC1D14Q9P2M4 693 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 NDOR1Q9UHB4 597 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 KCND3Q9UK17 655 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 ICKQ9UPZ9 632 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 GRIP1Q9Y3R0 1128 aa9.36□□□□□ -0.91
CD44-206ENST00000415148 TSPAN11A1L157 253 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 OR2AG2A6NM03 316 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 LEFTY2O00292 366 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 WWP2O00308 870 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 SCG5P05408 212 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 IGFBP1P08833 259 aaPredicted RBP9.35□□□□□ -0.91
CD44-206ENST00000415148 C1GALT1C1LP0DN25 315 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 ENDOUP21128 410 aaKnown RBP9.35□□□□□ -0.91
CD44-206ENST00000415148 TNFSF8P32971 234 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 CHI3L1P36222 383 aaPredicted RBP9.35□□□□□ -0.91
CD44-206ENST00000415148 C2orf80Q0P641 193 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 SLAMF1Q13291 335 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 CAMK2BQ13554 666 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 Q6ZVL8 140 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 IKBIPQ70UQ0 350 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 GAREM2Q75VX8 874 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 COMMD6Q7Z4G1 85 aa9.35□□□□□ -0.91
CD44-206ENST00000415148 TRIM69Q86WT6 500 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms