RNA–Protein interactions for RNA: ENST00000414829.2

LIMS1-206, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-206ENST00000414829 IGHV1-45A0A0A0MS14 117 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 A0A0G2JN53 185 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 B4GALT2O60909 372 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 CDC123O75794 336 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 CEACAM4O75871 244 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 BPGMP07738 259 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 UROSP10746 265 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 NEFHP12036 1026 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 COX6A1P12074 109 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 H2AFXP16104 143 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 ITGA3P26006 1051 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 ALDH3A1P30838 453 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 GSTM5P46439 218 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 NEK2P51955 445 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SLC18A1P54219 525 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SNRPNP63162 240 aaKnown RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SLC13A2Q13183 592 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SERTAD2Q14140 314 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 MYBPC3Q14896 1274 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 TERF2Q15554 542 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 LINC00303Q3SY05 128 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 LACTB2Q53H82 288 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SPIN4Q56A73 249 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SGO1Q5FBB7 561 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 CPZQ66K79 652 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 JMJD6Q6NYC1 403 aaPredicted RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 RPS27LQ71UM5 84 aaKnown RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 CPEB2Q7Z5Q1 589 aaKnown RBP13.78□□□□□ -0.2
LIMS1-206ENST00000414829 UBE3DQ7Z6J8 389 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 KBTBD2Q8IY47 623 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 GALNT16Q8N428 558 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 EFCAB3Q8N7B9 438 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SLC39A7Q92504 469 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 PTCHD1Q96NR3 888 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 SLC25A18Q9H1K4 315 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 KCNK9Q9NPC2 374 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 PRTFDC1Q9NRG1 225 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 NKIRAS1Q9NYS0 192 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 VPS29Q9UBQ0 182 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 FAM208BQ5VWN6 2430 aa13.78□□□□□ -0.2
LIMS1-206ENST00000414829 A0A0A6YYD5 115 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SERTM1A2A2V5 107 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 LOC400499M0QZD8 3231 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SAP18O00422 153 aaKnown RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 DYRK3O43781 588 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 JRKO75564 520 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 B3GALT4O96024 378 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 PDYNP01213 254 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SERPINA7P05543 415 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 NR2F6P10588 404 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 CPN2P22792 545 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 GRK2P25098 689 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ETV4P43268 484 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SERPINB4P48594 390 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 CCL11P51671 97 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 OR4D2P58180 307 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 TNFRSF17Q02223 184 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 EEF1A2Q05639 463 aaKnown RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ACTN3Q08043 901 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SLAMF1Q13291 335 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 RUNX2Q13950 521 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 IMPG1Q17R60 797 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 PLAG1Q6DJT9 500 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 FAAH2Q6GMR7 532 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF793Q6ZN11 406 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 RNF165Q6ZSG1 346 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ANKRD37Q7Z713 158 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 GPR180Q86V85 440 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 NUDCD3Q8IVD9 361 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 SCUBE1Q8IWY4 988 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 METTL4Q8N3J2 472 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 FAM47BQ8NA70 645 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 METTL2AQ96IZ6 378 aaKnown RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 CCT7Q99832 543 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 PELOQ9BRX2 385 aaKnown RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 GATA5Q9BWX5 397 aaPredicted RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 LHPPQ9H008 270 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 C12orf65Q9H3J6 166 aaKnown RBP13.77□□□□□ -0.21
LIMS1-206ENST00000414829 TMBIM4Q9HC24 238 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF160Q9HCG1 818 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 C5AR2Q9P296 337 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 TEKT2Q9UIF3 430 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 ZNF225Q9UK10 706 aa13.77□□□□□ -0.21
LIMS1-206ENST00000414829 MDC1Q14676 2089 aaKnown RBP13.76□□□□□ -0.21
LIMS1-206ENST00000414829 IGKV3D-11A0A0A0MRZ8 115 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 TMEM114B3SHH9 223 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 RTCAO00442 366 aaKnown RBP13.76□□□□□ -0.21
LIMS1-206ENST00000414829 CYR61O00622 381 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 PPP6CO00743 305 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 CTNSO60931 367 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 SH3BGRLO75368 114 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 SERPINE1P05121 402 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 UQCRHP07919 91 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 FAM58BPP0C7Q3 252 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 COX7A2P14406 83 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 BSGP35613 385 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 MAPK12P53778 367 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 FOXL2P58012 376 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 ACSM2AQ08AH3 577 aa13.76□□□□□ -0.21
LIMS1-206ENST00000414829 STX4Q12846 297 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms