RNA–Protein interactions for RNA: ENST00000414558.2

ATG4C-204, Transcript of autophagy related 4C cysteine peptidase, humanhuman

TSL 5

Gene ATG4C, Length 464 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4C-204ENST00000414558 FAM86B2P0C5J1 330 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 LBPP18428 481 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 KRT20P35900 424 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 PTENP60484 403 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 RPS27AP62979 156 aaKnown RBP3.82□□□□□ -1.8
ATG4C-204ENST00000414558 CCL14Q16627 93 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 C1orf141Q5JVX7 400 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 TMEM182Q6ZP80 229 aaPredicted RBP3.82□□□□□ -1.8
ATG4C-204ENST00000414558 CCDC191Q8NCU4 936 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 BEST4Q8NFU0 473 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 OR6T1Q8NGN1 323 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 OR13C5Q8NGS8 318 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 ST6GALNAC6Q969X2 333 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 SLC35C1Q96A29 364 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 BPIFA2Q96DR5 249 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 FERMT1Q9BQL6 677 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 OR10A4Q9H209 315 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 SLC6A5Q9Y345 797 aa3.82□□□□□ -1.8
ATG4C-204ENST00000414558 HBS1LQ9Y450 684 aaKnown RBP3.82□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF646O15015 1829 aaPredicted RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 IGKV6D-21A0A0A0MT36 114 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 FRAT2O75474 233 aaPredicted RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 RPN1P04843 607 aaKnown RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 LDHCP07864 332 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 VIMP08670 466 aaKnown RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 ANKRD34CP0C6C1 535 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 NPY4RP50391 375 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 IGLV3-21P80748 117 aaPredicted RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 REP15Q6BDI9 236 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 CLEC1AQ8NC01 280 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 C8orf46Q8TAG6 207 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 BADQ92934 168 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 RIT1Q92963 219 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 RAB3IPQ96QF0 476 aaPredicted RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 MTIF3Q9H2K0 278 aaKnown RBP3.81□□□□□ -1.8
ATG4C-204ENST00000414558 LIME1Q9H400 295 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 VIPAS39Q9H9C1 493 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 CLIC5Q9NZA1 410 aa3.81□□□□□ -1.8
ATG4C-204ENST00000414558 HTR3EA5X5Y0 456 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 FOXI3A8MTJ6 420 aaPredicted RBP3.8□□□□□ -1.8
ATG4C-204ENST00000414558 TMCO5BA8MYB1 307 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 P2RX6O15547 441 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF253O75346 499 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 GRAP2O75791 330 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 UMPSP11172 480 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 SRD5A2P31213 254 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 TIA1P31483 386 aaKnown RBP eCLIP3.8□□□□□ -1.8
ATG4C-204ENST00000414558 ABRQ12979 859 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 CEACAM7Q14002 265 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 RFTN1Q14699 578 aaPredicted RBP3.8□□□□□ -1.8
ATG4C-204ENST00000414558 PCK2Q16822 640 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 SLC22A6Q4U2R8 563 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 LIPJQ5W064 366 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 NEPROQ6NW34 567 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 NLRP14Q86W24 1093 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 DZIP1Q86YF9 867 aaKnown RBP3.8□□□□□ -1.8
ATG4C-204ENST00000414558 CREBRFQ8IUR6 639 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 C4orf19Q8IY42 314 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF781Q8N8C0 355 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 PRMT1Q99873 361 aaKnown RBP3.8□□□□□ -1.8
ATG4C-204ENST00000414558 CCM2Q9BSQ5 444 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 CENPOQ9BU64 300 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 S100A14Q9HCY8 104 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 DHRS4-AS1Q9P1J3 65 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 SH3GLB1Q9Y371 365 aa3.8□□□□□ -1.8
ATG4C-204ENST00000414558 C5orf52A6NGY3 159 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 SRPX2O60687 465 aaPredicted RBP3.79□□□□□ -1.8
ATG4C-204ENST00000414558 EIF5BO60841 1220 aaKnown RBP3.79□□□□□ -1.8
ATG4C-204ENST00000414558 PIGRP01833 764 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 ATP6V1B1P15313 513 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 PPP2R1AP30153 589 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 BRCC3P46736 316 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF41P51814 821 aaPredicted RBP3.79□□□□□ -1.8
ATG4C-204ENST00000414558 CAPZA1P52907 286 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 GPR50Q13585 617 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 PAMR1Q6UXH9 720 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 PRR22Q8IZ63 422 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 TDHQ8IZJ6 230 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 RNF149Q8NC42 400 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 MED17Q9NVC6 651 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 ANAPC5Q9UJX4 755 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 GMEB2Q9UKD1 530 aa3.79□□□□□ -1.8
ATG4C-204ENST00000414558 FAM220BPB1ANY3 271 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ACSL4O60488 711 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 PLOD3O60568 738 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 CLN5O75503 358 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 FAM58BPP0C7Q3 252 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF19P17023 458 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ACKR3P25106 362 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 OR3A1P47881 315 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ADARP55265 1226 aaKnown RBP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 CAPRIN1Q14444 709 aaKnown RBP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 TWISTNBQ3B726 338 aaPredicted RBP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 TTC31Q49AM3 519 aaPredicted RBP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ZNF776Q68DI1 518 aaPredicted RBP3.78□□□□□ -1.8
ATG4C-204ENST00000414558 RFWD3Q6PCD5 774 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 RAPH1Q70E73 1250 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 VASH2Q86V25 355 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 ANKRD46Q86W74 232 aa3.78□□□□□ -1.8
ATG4C-204ENST00000414558 SIPA1Q96FS4 1042 aa3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms