RNA–Protein interactions for RNA: ENST00000413899.1

HMGB1P11-201, Transcript of high mobility group box 1 pseudogene 11, humanhuman

BASIC

Gene HMGB1P11, Length 637 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P11-201ENST00000413899 SERINC4A6NH21 518 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ANKDD1BA6NHY2 528 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 RTCAO00442 366 aaKnown RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 TRAFD1O14545 582 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 CTDSPLO15194 276 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC7A4O43246 635 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ACSL4O60488 711 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLU7O95391 586 aaKnown RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 EEF2P13639 858 aaKnown RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 GOT1P17174 413 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 SRD5A2P31213 254 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 KCNJ1P48048 391 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ERVK-16P61578 105 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ARHGAP1Q07960 439 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF177Q13360 481 aaPredicted RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 LPAL2Q16609 132 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ALDH1L2Q3SY69 923 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF789Q5FWF6 425 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 LINC00696Q6ZRV3 163 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 OTOAQ7RTW8 1153 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 GTSCR1Q86UQ5 136 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 TDHQ8IZJ6 230 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 AQP11Q8NBQ7 271 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 OR5M9Q8NGP3 310 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 CD99L2Q8TCZ2 262 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ATXN7L3BQ96GX2 97 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 RASL10BQ96S79 203 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 PCDHB18PQ96TA0 734 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 C17orf62Q9BQA9 187 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 TMEM206Q9H813 350 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 SRD5A3Q9H8P0 318 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 RAB9BQ9NP90 201 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 MIS18AQ9NYP9 233 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 LIPT1Q9Y234 373 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 PCDHGA1Q9Y5H4 931 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ITSN1Q15811 1721 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 NALCNQ8IZF0 1738 aa3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 XRN1Q8IZH2 1706 aaKnown RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 SPAG9O60271 1321 aaKnown RBP3.15□□□□□ -1.91
HMGB1P11-201ENST00000413899 ADAMTSL3P82987 1691 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 USP54Q70EL1 1684 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 CPS1P31327 1500 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 FMN2Q9NZ56 1722 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 ADGRB2O60241 1585 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 IGHV3-38A0A0C4DH36 116 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 C2orf92A0A1B0GVN3 265 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 A0A1W2PPR1 153 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 GLTPD2A6NH11 291 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SHISA7A6NL88 538 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 MLNRO43193 412 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 RAD51DO75771 328 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC16A8O95907 504 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 THEGLP0DJG4 465 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 CTNNA2P26232 953 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 GIFP27352 417 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 CLCN4P51793 760 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 KRT83P78385 493 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 FAM189A2Q15884 450 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SNAI3Q3KNW1 292 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 PLPP4Q5VZY2 271 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 PM20D1Q6GTS8 502 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC27A4Q6P1M0 643 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 PODNL1Q6PEZ8 512 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 GBP6Q6ZN66 633 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 HOOK3Q86VS8 718 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 PHC2Q8IXK0 858 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 RPLP0P6Q8NHW5 317 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 GDAP1Q8TB36 358 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 C11orf52Q96A22 123 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SLC45A3Q96JT2 553 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 DPEP2Q9H4A9 486 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 COPS7BQ9H9Q2 264 aaPredicted RBP3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 DNAJC17Q9NVM6 304 aaKnown RBP3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 NLGN3Q9NZ94 848 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SEPT10Q9P0V9 454 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 KLK13Q9UKR3 277 aa3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 MRPS18CQ9Y3D5 142 aaKnown RBP3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 SCAF11Q99590 1463 aaKnown RBP3.14□□□□□ -1.91
HMGB1P11-201ENST00000413899 WDR81Q562E7 1941 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ALKQ9UM73 1620 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 A4D1N5 150 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ASB14A6NK59 587 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ZNF732B4DXR9 585 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 LMO7DNF2Z398 122 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 TNFSF12O43508 249 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 SNAP91O60641 907 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 LRCH4O75427 683 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 TBX6O95947 436 aaPredicted RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 GH1P01241 217 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 C8orf89P0DMQ9 161 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 SELEP16581 610 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ITIH1P19827 911 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 PKLRP30613 574 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 FEN1P39748 380 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 NDST2P52849 883 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 POU5F1Q01860 360 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 AKAP17AQ02040 695 aaKnown RBP3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 ABRQ12979 859 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 LRRC37A5PQ49AS3 106 aa3.13□□□□□ -1.91
HMGB1P11-201ENST00000413899 IQCCQ4KMZ1 466 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms