RNA–Protein interactions for RNA: ENST00000413725.5

SF1-206, Transcript of splicing factor 1, human

TSL 2

Gene SF1, Length 843 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SF1-206	ENST00000413725	NPIPB8	E9PQR5	432 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	PCDH7	O60245	1069 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	GUCY1B2	O75343	617 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	EED	O75530	441 aa	Known RBP	12.42	□□□□□ -0.42
SF1-206	ENST00000413725	CREG1	O75629	220 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	BMP10	O95393	424 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	FH	P07954	510 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	KIT	P10721	976 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	F8A1	P23610	371 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MAPK12	P53778	367 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	UCN	P55089	124 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	LIM2	P55344	173 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MC1R	Q01726	317 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MINDY4	Q4G0A6	757 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	VWA2	Q5GFL6	755 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	CCNYL2	Q5T2Q4	361 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MFSD4B	Q5TF39	518 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	PRSS58	Q8IYP2	241 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	EFCAB3	Q8N7B9	438 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	ZSCAN1	Q8NBB4	408 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	OR2Y1	Q8NGV0	311 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	PIWIL2	Q8TC59	973 aa	Known RBP	12.42	□□□□□ -0.42
SF1-206	ENST00000413725	CHTF18	Q8WVB6	975 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	STARD8	Q92502	1023 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	APIP	Q96GX9	242 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	SLC45A3	Q96JT2	553 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	PPP3R2	Q96LZ3	170 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	SPSB2	Q99619	263 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	CRB3	Q9BUF7	120 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	SOX17	Q9H6I2	414 aa	Predicted RBP	12.42	□□□□□ -0.42
SF1-206	ENST00000413725	LRTM1	Q9HBL6	345 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MARCO	Q9UEW3	520 aa	Predicted RBP	12.42	□□□□□ -0.42
SF1-206	ENST00000413725	IL17B	Q9UHF5	180 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725	MCM8	Q9UJA3	840 aa		12.42	□□□□□ -0.42
SF1-206	ENST00000413725		A0A087WV48	116 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	GNG14	A0A1W2PPG7	69 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	BLACE	A4D250	179 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TRPC5OS	A6NMA1	111 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	ZNF891	A8MT65	544 aa	Predicted RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TAF4	O00268	1085 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	HDAC3	O15379	428 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TMPRSS11D	O60235	418 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	CNOT3	O75175	753 aa	Known RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	DNAJB6	O75190	326 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SEC22B	O75396	215 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	KLF7	O75840	302 aa	Predicted RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	IGHE	P01854	428 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	GBA	P04062	536 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	HEXB	P07686	556 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	CYC1	P08574	325 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	FAM58BP	P0C7Q3	252 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	CPN2	P22792	545 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TPP2	P29144	1249 aa	Predicted RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TLX1	P31314	330 aa	Predicted RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TIA1	P31483	386 aa	Known RBP eCLIP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	BUD31	P41223	144 aa	Predicted RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	RPS18	P62269	152 aa	Known RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	KLC1	Q07866	573 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SRSF6	Q13247	344 aa	Known RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TUBB8	Q3ZCM7	444 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	ATP6AP1L	Q52LC2	224 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	XKR7	Q5GH72	579 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SHISA6	Q6ZSJ9	500 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725		Q6ZSR9	355 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	GPR180	Q86V85	440 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	RAB43	Q86YS6	212 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	OR2T11	Q8NH01	316 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TUBGCP3	Q96CW5	907 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	MAPKAP1	Q9BPZ7	522 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	RBCK1	Q9BYM8	510 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	NUF2	Q9BZD4	464 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	WDR41	Q9HAD4	459 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SLCO1B3	Q9NPD5	702 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SEMA3G	Q9NS98	782 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	SIRT5	Q9NXA8	310 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	KCMF1	Q9P0J7	381 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	C3orf18	Q9UK00	162 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	FBXW2	Q9UKT8	454 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	MKL2	Q9ULH7	1088 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	TMED5	Q9Y3A6	229 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	CCL27	Q9Y4X3	112 aa		12.41	□□□□□ -0.42
SF1-206	ENST00000413725	MRPS18B	Q9Y676	258 aa	Known RBP	12.41	□□□□□ -0.42
SF1-206	ENST00000413725	ATP6AP2	A0A1C7CYW4	349 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	TCP11X1	B4DZS4	312 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	CLDN4	O14493	209 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	PCDH17	O14917	1159 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	LSM1	O15116	133 aa	Known RBP	12.4	□□□□□ -0.42
SF1-206	ENST00000413725	B4GALT2	O60909	372 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	VPS4B	O75351	444 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	JRK	O75564	520 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	ATP6AP2	O75787	350 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	CDC123	O75794	336 aa	Predicted RBP	12.4	□□□□□ -0.42
SF1-206	ENST00000413725	RECK	O95980	971 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	NR2F6	P10588	404 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	MAPK1	P28482	360 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	MDH1	P40925	334 aa	Known RBP	12.4	□□□□□ -0.42
SF1-206	ENST00000413725	GSTM5	P46439	218 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	EMP2	P54851	167 aa		12.4	□□□□□ -0.42
SF1-206	ENST00000413725	HNRNPH2	P55795	449 aa	Known RBP	12.4	□□□□□ -0.42
SF1-206	ENST00000413725	TMPRSS3	P57727	454 aa		12.4	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms