RNA–Protein interactions for RNA: ENST00000413186.6

SYNE1-211, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 5 BASIC

Gene SYNE1, Length 4,860 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-211ENST00000413186 SLC7A8Q9UHI5 535 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 A0A1W2PP18 115 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 TRBC2A0A5B9 178 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SLC5A10A0PJK1 596 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 POM121BA6NF01 834 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 LRRC14BA6NHZ5 514 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PEX12O00623 359 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SOX30O94993 753 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 CD160O95971 181 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 G6PDP11413 515 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ALOX12P18054 663 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PPP2CBP62714 309 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 FOLH1Q04609 750 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 KANK2Q63ZY3 851 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ATG9BQ674R7 924 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PACRGLQ8N7B6 248 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 OR4K14Q8NGD5 310 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ENKURQ8TC29 256 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 MMABQ96EY8 250 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 CD180Q99467 661 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PRRX2Q99811 253 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 TEX101Q9BY14 249 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 C12orf4Q9NQ89 552 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SEC14L3Q9UDX4 400 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 H3BNX3 289 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 FOXD2O60548 495 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 GREM1O60565 184 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 CLEC3AO75596 197 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 PGRP06401 933 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 KIR2DL1P43626 348 aaPredicted RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ERVPABLB-1P60509 514 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SH3BP2P78314 561 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 RPP38P78345 283 aaKnown RBP8.17□□□□□ -1.1
SYNE1-211ENST00000413186 LIPEQ05469 1076 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 C3orf33Q6P1S2 294 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 ANKRD46Q86W74 232 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 TICAM1Q8IUC6 712 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 OR7G3Q8NG95 312 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 OR56A1Q8NGH5 318 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 UBTD2Q8WUN7 234 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 GAREM1Q9H706 876 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 TUBG2Q9NRH3 451 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 SRPK3Q9UPE1 567 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 AP4B1Q9Y6B7 739 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 COMMD3-BMI1R4GMX3 469 aa8.17□□□□□ -1.1
SYNE1-211ENST00000413186 C1orf226A1L170 272 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 E7EQ34 232 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 BLMHQ13867 455 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 FGD3Q5JSP0 725 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 TADA1Q96BN2 335 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 MOAP1Q96BY2 351 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 LINC00615Q96LM1 132 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ADAMTS6Q9UKP5 1117 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 MAP4K5Q9Y4K4 846 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 DNAJC15Q9Y5T4 150 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 PTPRZ1P23471 2315 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 SIP14410 1827 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 WDFY3Q8IZQ1 3526 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM202A6NGA9 273 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 SULT1B1O43704 296 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 SNAPC5O75971 98 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CD53P19397 219 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 FCARP24071 287 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ATP5A1P25705 553 aaKnown RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 SLC7A1P30825 629 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 GMPRP36959 345 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 FAM92BQ6ZTR7 304 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ZSWIM9Q86XI8 627 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 SFRP1Q8N474 314 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 COX18Q8N8Q8 333 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 LKAAEAR1Q8TD35 194 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CENPNQ96H22 339 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ADAP2Q9NPF8 381 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 BTBD3Q9Y2F9 522 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 PADI2Q9Y2J8 665 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 K7ESM1 405 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CNOT3O75175 753 aaKnown RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 LDOC1O95751 146 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 FESP07332 822 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CHRM5P08912 532 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 MAGEA12P43365 314 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CCR10P46092 362 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 GLYATQ6IB77 296 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 OR52E8Q6IFG1 317 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ZBTB8BQ8NAP8 495 aaPredicted RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 GOLM1Q8NBJ4 401 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 PJA1Q8NG27 643 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 HDAC2Q92769 488 aaKnown RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 RIT1Q92963 219 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 PDXPQ96GD0 296 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 WDR83Q9BRX9 315 aaKnown RBP8.16□□□□□ -1.1
SYNE1-211ENST00000413186 CCDC106Q9BWC9 280 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ALG2Q9H553 416 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 ACTL8Q9H568 366 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 BPTFQ12830 3046 aa8.16□□□□□ -1.1
SYNE1-211ENST00000413186 PRORSD1PA6NEY8 169 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 TMEM221A6NGB7 291 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 A8MUI8 341 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 M0R296 226 aa8.15□□□□□ -1.1
SYNE1-211ENST00000413186 MATN4O95460 622 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms