RNA–Protein interactions for RNA: ENST00000411900.5

PKP4-203, Transcript of plakophilin 4, humanhuman

TSL 4

Gene PKP4, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-203ENST00000411900 CSF3RQ99062 836 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 REXO4Q9GZR2 422 aaKnown RBP9.41□□□□□ -0.9
PKP4-203ENST00000411900 PPCSQ9HAB8 311 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 PRTFDC1Q9NRG1 225 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 GPRC5BQ9NZH0 403 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 LRFN1Q9P244 771 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 SEC14L3Q9UDX4 400 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 LGALS13Q9UHV8 139 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 PTBP2Q9UKA9 531 aaKnown RBP9.41□□□□□ -0.9
PKP4-203ENST00000411900 ZNF490Q9ULM2 529 aaPredicted RBP9.41□□□□□ -0.9
PKP4-203ENST00000411900 CACNA1DQ01668 2161 aa9.41□□□□□ -0.9
PKP4-203ENST00000411900 IGKV3D-11A0A0A0MRZ8 115 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 TRBV11-1A0A0K0K1C0 115 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 TCRBV16S1A1N1A0A5B0 115 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 TGFBR3LH3BV60 316 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 SAP18O00422 153 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 RTCAO00442 366 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 B3GALT2O43825 422 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 CLEC3AO75596 197 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 CRYABP02511 175 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 STSP08842 583 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 LTA4HP09960 611 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 PCNAP12004 261 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 CD46P15529 392 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 EEF1DP29692 281 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 PHBP35232 272 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 DCTP40126 519 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 MSH2P43246 934 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 RAB38P57729 211 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 IRF8Q02556 426 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 ILF2Q12905 390 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 SLC13A2Q13183 592 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 MAPKAPK3Q16644 382 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 TRIM40Q6P9F5 258 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 ADGRD1Q6QNK2 874 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 ISCA2Q86U28 154 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 RPS19BP1Q86WX3 136 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 RNF175Q8N4F7 328 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 ARMC2Q8NEN0 867 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 NFAM1Q8NET5 270 aaPredicted RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 OR2L5Q8NG80 312 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 STAG3L4Q8TBR4 150 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 EPS8L3Q8TE67 593 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 PTCD3Q96EY7 689 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 ATP6V1G3Q96LB4 118 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 QRFPRQ96P65 431 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 CAPS2Q9BXY5 557 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 CD244Q9BZW8 370 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 COPS7BQ9H9Q2 264 aaPredicted RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 LIN28AQ9H9Z2 209 aaKnown RBP9.4□□□□□ -0.9
PKP4-203ENST00000411900 IGSF5Q9NSI5 407 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 NUDT4Q9NZJ9 180 aa9.4□□□□□ -0.9
PKP4-203ENST00000411900 DOPEY1Q5JWR5 2465 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 A0A1B0GUH1 482 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 LRRC14BA6NHZ5 514 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 NPIPA5E9PKD4 350 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 KERAO60938 352 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 NEURL1O76050 574 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 TGFB1P01137 390 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SP1P08047 785 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 MYZAPP0CAP1 466 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 CRABP2P29373 138 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 MTTPP55157 894 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 LIM2P55344 173 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 PER3P56645 1201 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 MLF1P58340 268 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 ALDH6A1Q02252 535 aaKnown RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 ID2Q02363 134 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 DDX39BQ13838 428 aaKnown RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 ZRSR2Q15696 482 aaKnown RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 HIST2H2ACQ16777 129 aaPredicted RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 KRT71Q3SY84 523 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 PAGE2BQ5JRK9 111 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 HIST2H2AA3Q6FI13 130 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SLC25A25Q6KCM7 469 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 ABHD17CQ6PCB6 329 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 ZNF793Q6ZN11 406 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 C16orf47Q6ZP98 133 aaPredicted RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 LRRC70Q7Z2Q7 622 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 MYLK4Q86YV6 388 aaPredicted RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 SCUBE1Q8IWY4 988 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 RIBC1Q8N443 379 aaPredicted RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 DNAJB8Q8NHS0 232 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 MZB1Q8WU39 189 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 DCAKDQ8WVC6 231 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SLC44A1Q8WWI5 657 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 NCLNQ969V3 563 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 ZBTB9Q96C00 473 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 WDR34Q96EX3 536 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SCMH1Q96GD3 660 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SERINC2Q96SA4 455 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 ATOH8Q96SQ7 321 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 CCDC77Q9BR77 488 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 EFCAB11Q9BUY7 163 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 SORBS1Q9BX66 1292 aaKnown RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 NPLQ9BXD5 320 aaPredicted RBP9.39□□□□□ -0.91
PKP4-203ENST00000411900 DEFB126Q9BYW3 111 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 EHD1Q9H4M9 534 aa9.39□□□□□ -0.91
PKP4-203ENST00000411900 NT5DC2Q9H857 520 aa9.39□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms