RNA–Protein interactions for RNA: ENST00000411146.1

RNU2-55P-201, Transcript of RNA, U2 small nuclear 55, pseudogene, humanhuman

BASIC

Gene RNU2-55P, Length 174 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-55P-201ENST00000411146 DFNA5O60443 496 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZBED4O75132 1171 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 NR2C1P13056 603 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 HNRNPA2B1P22626 353 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 CTNNA2P26232 953 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 RPL9P32969 192 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 PCGF2P35227 344 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 LIMK1P53667 647 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 UBXN2AP68543 259 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 CNTN1Q12860 1018 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 STK4Q13043 487 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 CHAF1BQ13112 559 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 GRB14Q14449 540 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 BECN1Q14457 450 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 MAPK11Q15759 364 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 RBBP7Q16576 425 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 PAN3Q58A45 887 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 BMP2KLQ5H9B9 411 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF691Q5VV52 312 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 REP15Q6BDI9 236 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 FUT10Q6P4F1 479 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 DET1Q7L5Y6 550 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SYVN1Q86TM6 617 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 KRTAP13-1Q8IUC0 172 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SMC5Q8IY18 1101 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 TDHQ8IZJ6 230 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 TAGAPQ8N103 731 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SLC43A2Q8N370 569 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 RYBPQ8N488 228 aaPredicted RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 OR2L5Q8NG80 312 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SRSF12Q8WXF0 261 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 P2RX5Q93086 422 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SLC35C1Q96A29 364 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SPSB1Q96BD6 273 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 ELSPBP1Q96BH3 223 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 C16orf74Q96GX8 76 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 MAGEB18Q96M61 343 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 CASD1Q96PB1 797 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 PLEKHF1Q96S99 279 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SDF4Q9BRK5 362 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 NT5DC2Q9H857 520 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 PATZ1Q9HBE1 687 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 XAB2Q9HCS7 855 aaKnown RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 SH3GLB2Q9NR46 395 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 FAM212BQ9NTI7 297 aaPredicted RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 BLOC1S4Q9NUP1 217 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 KLRF1Q9NZS2 232 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 DBF4Q9UBU7 674 aaPredicted RBP0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 VPS28Q9UK41 221 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF175Q9Y473 711 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 TRPV2Q9Y5S1 764 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 OTOGLQ3ZCN5 2332 aa0.8□□□□□ -2.28
RNU2-55P-201ENST00000411146 TRAV18A0A075B6X5 111 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 NEDD8-MDP1E9PL57 170 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PGRMC2O15173 223 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ACSL4O60488 711 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 BAIAP3O94812 1187 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 HSPB1P04792 205 aaKnown RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 SKILP12757 684 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 LBPP18428 481 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PSMB4P28070 264 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 HSD17B3P37058 310 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PPOXP50336 477 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 LRRC63Q05C16 580 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 EPS8Q12929 822 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 DDX10Q13206 875 aaKnown RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 FASTKQ14296 549 aaKnown RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 WTAPQ15007 396 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 C14orf28Q4W4Y0 310 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZRANB3Q5FWF4 1079 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 WDR25Q64LD2 544 aaPredicted RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 GCNT7Q6ZNI0 430 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 NRARPQ7Z6K4 114 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ADAMTSL2Q86TH1 951 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 GPR137CQ8N3F9 429 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PRSS35Q8N3Z0 413 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 TBCKQ8TEA7 893 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 FAF2Q96CS3 445 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 SIPA1Q96FS4 1042 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PIWIL1Q96J94 861 aaKnown RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF558Q96NG5 402 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 CHRDL1Q9BU40 450 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 KATNB1Q9BVA0 655 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 FAM129AQ9BZQ8 928 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 KCNMB3Q9NPA1 279 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 TMOD3Q9NYL9 352 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 SPG21Q9NZD8 308 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 WDR35Q9P2L0 1181 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ZNF282Q9UDV7 671 aaPredicted RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 UBQLN2Q9UHD9 624 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 ANAPC2Q9UJX6 822 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 PPIEQ9UNP9 301 aaKnown RBP0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 CA5BQ9Y2D0 317 aa0.79□□□□□ -2.28
RNU2-55P-201ENST00000411146 COL5A1P20908 1838 aaPredicted RBP0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 KIR2DL5BA0A0G2JN68 375 aa0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 KIR2DL5BA0A0G2JPC4 375 aa0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 A0A1W2PPW3 197 aa0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 A0A1W2PQ67 120 aa0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 URADA6NGE7 173 aa0.78□□□□□ -2.28
RNU2-55P-201ENST00000411146 TCP10L2B9ZVM9 353 aa0.78□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms