RNA–Protein interactions for RNA: ENST00000410517.1

RNU6-1140P-201, Transcript of RNA, U6 small nuclear 1140, pseudogene, humanhuman

BASIC

Gene RNU6-1140P, Length 106 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1140P-201ENST00000410517 PLGP00747 810 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GH1P01241 217 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PTMAP06454 111 aaKnown RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ASGR1P07306 291 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CA3P07451 260 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GSTA2P09210 222 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM157CP0CG43 387 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM49P0CI25 452 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM49CP0CI26 452 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SMIM18P0DKX4 95 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KRT3P12035 628 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GP1BBP13224 206 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 GLULP15104 373 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 STMN1P16949 149 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 HOXB8P17481 243 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CA4P22748 312 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 AADACP22760 399 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MPZP25189 248 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TLX1P31314 330 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CEACAM8P31997 349 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PDLIM4P50479 330 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CLDN17P56750 224 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 AKAP17AQ02040 695 aaKnown RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MECOMQ03112 1051 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARHGAP1Q07960 439 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DMPKQ09013 629 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RCN2Q14257 317 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NONOQ15233 471 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAPK11Q15759 364 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CCL14Q16627 93 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SGSM1Q2NKQ1 1148 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 KIAA1644Q3SXP7 199 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZC2HC1CQ53FD0 456 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DCAF10Q5QP82 559 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MPP7Q5T2T1 576 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DDI2Q5TDH0 399 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ETFRF1Q6IPR1 90 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM65Q6PJ69 517 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SUSD1Q6UWL2 747 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RBMS3Q6XE24 437 aaKnown RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C15orf39Q6ZRI6 1047 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CHMP1BQ7LBR1 199 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ANKRD46Q86W74 232 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MEX3DQ86XN8 651 aaKnown RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM139Q8IV31 216 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RCOR2Q8IZ40 523 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 FAM9BQ8IZU0 186 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SYCP3Q8IZU3 236 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR4D10Q8NGI6 311 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 OR4C15Q8NGM1 316 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LRRC8CQ8TDW0 803 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARNTL2Q8WYA1 636 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARHGAP45Q92619 1136 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RIT1Q92963 219 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATP6V0A1Q93050 837 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MAGED4Q96JG8 741 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NECTIN4Q96NY8 510 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TSSK2Q96PF2 358 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ATG101Q9BSB4 218 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRIM51Q9BSJ1 452 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC5A7Q9GZV3 580 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 P2RY12Q9H244 342 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 MMADHCQ9H3L0 296 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RPAP3Q9H6T3 665 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMEM206Q9H813 350 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C10orf88Q9H8K7 445 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 Q9H8V8 135 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 VIPAS39Q9H9C1 493 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 LMAN1LQ9HAT1 526 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RNPEPL1Q9HAU8 725 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 Q9N2K0 584 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SDR39U1Q9NRG7 319 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF701Q9NV72 531 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DONSONQ9NYP3 566 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RAI14Q9P0K7 980 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZNF624Q9P2J8 865 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TEKT2Q9UIF3 430 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ELF5Q9UKW6 265 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RNF150Q9ULK6 438 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 WDR83OSQ9Y284 106 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TMED3Q9Y3Q3 217 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 COLEC10Q9Y6Z7 277 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SYNRGQ9UMZ2 1314 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DCHS1Q96JQ0 3298 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ECM29Q5VYK3 1845 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SPTBN4Q9H254 2564 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ZFHX4Q86UP3 3567 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CACNA1HO95180 2353 aa2.35□□□□□ -2.03
RNU6-1140P-201ENST00000410517 RIF1Q5UIP0 2472 aaKnown RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 DMXL1Q9Y485 3027 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 ARAP2Q8WZ64 1704 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 TRAV18A0A075B6X5 111 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 IGLV9-49A0A0B4J1Y8 123 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 A0A0B4J203 849 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 NKX6-3A6NJ46 265 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 PMS2P5A8MQ11 134 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 C5orf67F2Z3F1 127 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 M0R296 226 aa2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 CACNB4O00305 520 aaPredicted RBP2.34□□□□□ -2.03
RNU6-1140P-201ENST00000410517 SLC1A7O00341 560 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms