RNA–Protein interactions for RNA: ENST00000410457.1

RNU2-28P-201, Transcript of RNA, U2 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU2-28P, Length 189 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-28P-201ENST00000410457 PAX9P55771 341 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 INAQ16352 499 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 SPANXN4Q5MJ08 99 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 FFAR4Q5NUL3 377 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 OR6B2Q6IFH4 312 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 FIP1L1Q6UN15 594 aaKnown RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 OLFM4Q6UX06 510 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 TMEM64Q6YI46 380 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 C17orf64Q86WR6 236 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 DND1Q8IYX4 353 aaKnown RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 RAB42Q8N4Z0 105 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 OR6M1Q8NGM8 313 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 C8orf46Q8TAG6 207 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 SMAP2Q8WU79 429 aaPredicted RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 ARHGAP45Q92619 1136 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 MRPL38Q96DV4 380 aaKnown RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 PRAC1Q96KF2 57 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 NODALQ96S42 347 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 PAPOLGQ9BWT3 736 aaKnown RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 FTHL17Q9BXU8 183 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 HOXD1Q9GZZ0 328 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 MTHFD2LQ9H903 347 aaPredicted RBP3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 S100A14Q9HCY8 104 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 HOMER3Q9NSC5 361 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 ICAM5Q9UMF0 924 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 TNFRSF18Q9Y5U5 241 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 CLCA3PQ9Y6N3 262 aa3.53□□□□□ -1.84
RNU2-28P-201ENST00000410457 NEDD4P46934 1319 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 A0A1W2PR80 420 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 C15orf61A6NNL5 157 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 TCP10L2B9ZVM9 353 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 LMO7DNF2Z398 122 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 EEF2KO00418 725 aaKnown RBP3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 ARPC1BO15143 372 aaKnown RBP3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 GMNNO75496 209 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 OR6B1O95007 311 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 TGFAP01135 160 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 KRT5P13647 590 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 GNB3P16520 340 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 DESP17661 470 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 GIFP27352 417 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 CALRP27797 417 aaKnown RBP3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 CHRNB4P30926 498 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 MAP2K2P36507 400 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 PITPNBP48739 271 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 CAMLGP49069 296 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 GEMP55040 296 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 XGP55808 180 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 GMFBP60983 142 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 HERV-K104P63124 156 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 DRP2Q13474 957 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 HEPACAMQ14CZ8 416 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 OR1C1Q15619 314 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 WDR88Q6ZMY6 472 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 CDHR3Q6ZTQ4 885 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 Q6ZVQ6 151 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 OR6S1Q8NH40 331 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 DQX1Q8TE96 717 aaKnown RBP3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 SMPDL3AQ92484 453 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 ESAMQ96AP7 390 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 RAB39BQ96DA2 213 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 F2RL3Q96RI0 385 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 AGPAT1Q99943 283 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 ABCG4Q9H172 646 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 DDX28Q9NUL7 540 aaKnown RBP3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 FAM153AQ9UHL3 310 aa3.52□□□□□ -1.85
RNU2-28P-201ENST00000410457 ZNF195O14628 629 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 LRP3O75074 770 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 LRCH4O75427 683 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 TXNDC12O95881 172 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 PDGFBP01127 241 aaPredicted RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 APRTP07741 180 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 GHRP10912 638 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 GLRA1P23415 457 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 EDNRAP25101 427 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 RPA1P27694 616 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 TSFMP43897 325 aaKnown RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 SLC6A12P48065 614 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 NUMBP49757 651 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 GNB1P62873 340 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 C3AR1Q16581 482 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 ZNF876PQ49A33 203 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 MPPE1Q53F39 396 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 FASTKD1Q53R41 847 aaKnown RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 C1orf189Q5VU69 101 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 CAPN13Q6MZZ7 669 aaPredicted RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 MEX3BQ6ZN04 569 aaKnown RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 PTAR1Q7Z6K3 402 aaPredicted RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 HOGA1Q86XE5 327 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 CACUL1Q86Y37 369 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 CCDC197Q8NCU1 140 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 OR4L1Q8NH43 312 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 FAM76AQ8TAV0 307 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 GOLGA5Q8TBA6 731 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 MRGPRDQ8TDS7 321 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 ZNF501Q96CX3 271 aaPredicted RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 GMPPAQ96IJ6 420 aaPredicted RBP3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 RPGRIP1Q96KN7 1286 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 FAM218AQ96MZ4 157 aa3.51□□□□□ -1.85
RNU2-28P-201ENST00000410457 PGLYRP2Q96PD5 576 aa3.51□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms