RNA–Protein interactions for RNA: ENST00000410093.5

LIMS1-205, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene LIMS1, Length 1,526 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-205ENST00000410093 SMURF2Q9HAU4 748 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 DNAAF2Q9NVR5 837 aaKnown RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TAAR2Q9P1P5 351 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TMEFF2Q9UIK5 374 aaPredicted RBP12.94□□□□□ -0.34
LIMS1-205ENST00000410093 PCOLCE2Q9UKZ9 415 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 PLAGL1Q9UM63 463 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 SNX7Q9UNH6 387 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TECTAO75443 2155 aa12.94□□□□□ -0.34
LIMS1-205ENST00000410093 TMEM247A6NEH6 219 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 H7BY64 318 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 BCKDKO14874 412 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 OR1F1O43749 312 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 OR6B1O95007 311 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ACADMP11310 421 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CRHBPP24387 322 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CMPK1P30085 196 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 NUP107P57740 925 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 YPEL5P62699 121 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ZIK1Q3SY52 487 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 OR4C11Q6IEV9 310 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 FAHD1Q6P587 224 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 BHLHB9Q6PI77 547 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ANGPTL8Q6UXH0 198 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SLC44A3Q8N4M1 653 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ANKRD53Q8N9V6 530 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 IL17RCQ8NAC3 791 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 GEMIN6Q8WXD5 167 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 MOAP1Q96BY2 351 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SIPA1Q96FS4 1042 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PRAP1Q96NZ9 151 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PSD2Q9BQI7 771 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ACAT2Q9BWD1 397 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 AMBRA1Q9C0C7 1298 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 EPS8L2Q9H6S3 715 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 RUBCNLQ9H714 662 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 MRPS30Q9NP92 439 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 A4GALTQ9NPC4 353 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 TM7SF3Q9NS93 570 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 KIF17Q9P2E2 1029 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 HEATR5BQ9P2D3 2071 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 MYOCOSA0A1B0GUC4 107 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 A0A1W2PQF6 199 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ARRDC5A6NEK1 342 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SAP18O00422 153 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PRICKLE3O43900 615 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 NOL3O60936 208 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SH3BGRLO75368 114 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 NTRK1P04629 796 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SRFP11831 508 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ANXA8P13928 327 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 RPL10P27635 214 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CALRP27797 417 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 AVPR2P30518 371 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PXNP49023 591 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 MANFP55145 182 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SEC13P55735 322 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PCBP3P57721 371 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PCBP4P57723 403 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 DSTNP60981 165 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ISL1P61371 349 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 VLDLRP98155 873 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 EEF1A2Q05639 463 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 GNA13Q14344 377 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PLCL1Q15111 1095 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 MLF2Q15773 248 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ZIC1Q15915 447 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 RPE65Q16518 533 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ADPRMQ3LIE5 342 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SAXO2Q658L1 398 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 REEP3Q6NUK4 255 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 FAM92BQ6ZTR7 304 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 LINC01555Q8NAE3 123 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 FLCNQ8NFG4 579 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CIDECQ96AQ7 238 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 NMD3Q96D46 503 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PDXPQ96GD0 296 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 TPD52L3Q96J77 140 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 F2RL3Q96RI0 385 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 DOK1Q99704 481 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 DPH2Q9BQC3 489 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CCNB1IP1Q9NPC3 277 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 IMP3Q9NV31 184 aaKnown RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 GPATCH2Q9NW75 528 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 CUEDC1Q9NWM3 386 aaPredicted RBP12.93□□□□□ -0.34
LIMS1-205ENST00000410093 UTS2RQ9UKP6 389 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 ABCG2Q9UNQ0 655 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 WDR37Q9Y2I8 494 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 TPRKBQ9Y3C4 175 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 GPSM3Q9Y4H4 160 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PCDHGB1Q9Y5G3 927 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 PCDHGA8Q9Y5G5 932 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 SNX5Q9Y5X3 404 aa12.93□□□□□ -0.34
LIMS1-205ENST00000410093 COL4A2P08572 1712 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 PRSS38A1L453 326 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 LRIT2A6NDA9 550 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 LRRC72A6NJI9 287 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 PDZK1P1A8MUH7 402 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 MYO1GB0I1T2 1018 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 H3BSA7 217 aa12.92□□□□□ -0.34
LIMS1-205ENST00000410093 ADAM23O75077 832 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms