RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 ZNF766Q5HY98 468 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 ZNF468Q5VIY5 522 aaPredicted RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 SPINK14Q6IE38 97 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 CLNKQ7Z7G1 428 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 RPS19BP1Q86WX3 136 aaKnown RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 ZNF595Q8IYB9 648 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 LGI4Q8N135 537 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 CEP112Q8N8E3 955 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 ACOT4Q8N9L9 421 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 APCDD1LQ8NCL9 501 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 HUS1BQ8NHY5 278 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 SUN3Q8TAQ9 357 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 ADAMTS18Q8TE60 1221 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 NR4A3Q92570 626 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 MAPKAP1Q9BPZ7 522 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 UTP23Q9BRU9 249 aaKnown RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 TBCDQ9BTW9 1192 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 HES7Q9BYE0 225 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 OR51B5Q9H339 312 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 COPS7BQ9H9Q2 264 aaPredicted RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 PNO1Q9NRX1 252 aaKnown RBP16.55■□□□□ 0.24
LSM5-204ENST00000409909 ZNF180Q9UJW8 692 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 ANGPTL3Q9Y5C1 460 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 IKBKGQ9Y6K9 419 aa16.55■□□□□ 0.24
LSM5-204ENST00000409909 A0A087WUV0 522 aaPredicted RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 MYOCOSA0A1B0GUC4 107 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 TRIM49D1C9J1S8 452 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 CLDN4O14493 209 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 WISP2O76076 250 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 RASAL1O95294 804 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 LDLRP01130 860 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 MST1P26927 711 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 TPP2P29144 1249 aaPredicted RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 SERPINB1P30740 379 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 GPR143P51810 404 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 PMP22Q01453 160 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 DDX39BQ13838 428 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 GTF2H2Q13888 395 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 OR1C1Q15619 314 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 DEPDC1Q5TB30 811 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 KHDRBS2Q5VWX1 349 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 LIPJQ5W064 366 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 GTF2H2CQ6P1K8 395 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 CHSY3Q70JA7 882 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 GOLGA7Q7Z5G4 137 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 SRFBP1Q8NEF9 429 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 CMTM7Q96FZ5 175 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 SORBS1Q9BX66 1292 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 IPPKQ9H8X2 491 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 ACTR8Q9H981 624 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 LYRM4Q9HD34 91 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 ABI3Q9P2A4 366 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 ZNF223Q9UK11 482 aaPredicted RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 PPIEQ9UNP9 301 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 OSGIN2Q9Y236 505 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 SLC5A6Q9Y289 635 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 MRPS33Q9Y291 106 aaKnown RBP16.54■□□□□ 0.24
LSM5-204ENST00000409909 PCDHGB6Q9Y5F9 930 aa16.54■□□□□ 0.24
LSM5-204ENST00000409909 CRYBG3Q68DQ2 2970 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 DIDO1Q9BTC0 2240 aaKnown RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 CTNSO60931 367 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 KRT38O76015 456 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 NEURL1O76050 574 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 SCELO95171 688 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 MYBL2P10244 700 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 HIST1H1TP22492 207 aaPredicted RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 GCAP28676 217 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 PIK3CBP42338 1070 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 MLF1P58340 268 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 TERF2Q15554 542 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 AP5B1Q2VPB7 878 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 TAOK1Q7L7X3 1001 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 ZNF227Q86WZ6 799 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 MYLK4Q86YV6 388 aaPredicted RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 IFT20Q8IY31 132 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 ARMC10Q8N2F6 343 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 PTGR2Q8N8N7 351 aaPredicted RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 LRRN4CLQ8ND94 238 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 B3GNT7Q8NFL0 401 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 DNAJB8Q8NHS0 232 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 PHF21BQ96EK2 531 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 SCMH1Q96GD3 660 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 MTERF1Q99551 399 aaKnown RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 ROGDIQ9GZN7 287 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 DMRT3Q9NQL9 472 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 KLHL1Q9NR64 748 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 ADGRE2Q9UHX3 823 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 RNF11Q9Y3C5 154 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 TSC22D4Q9Y3Q8 395 aa16.53■□□□□ 0.24
LSM5-204ENST00000409909 TNPO3Q9Y5L0 923 aaKnown RBP16.53■□□□□ 0.24
LSM5-204ENST00000409909 UNC79Q9P2D8 2635 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 TRBV11-1A0A0K0K1C0 115 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 H0YIV9 168 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 OR7A17O14581 309 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 UGDHO60701 494 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 DDAH2O95865 285 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 RBP1P09455 135 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 FAM153BP0C7A2 387 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 RHOXF2BP0C7M4 288 aa16.52■□□□□ 0.24
LSM5-204ENST00000409909 COL6A2P12110 1019 aa16.52■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms