RNA–Protein interactions for RNA: ENST00000409836.3

GYPC-203, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GYPC, Length 932 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-203ENST00000409836 KRT6BP04259 564 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 CREB1P16220 341 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 SSR2P43308 183 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 KRT6CP48668 564 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 SLC18A1P54219 525 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 AP2B1P63010 937 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 IGLV3-21P80748 117 aaPredicted RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 TBL3Q12788 808 aaKnown RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 DDX39BQ13838 428 aaKnown RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 CASP8Q14790 479 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 MINDY4Q4G0A6 757 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 VWA5B1Q5TIE3 1220 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 PLAG1Q6DJT9 500 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 OR4C11Q6IEV9 310 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 LANCL3Q6ZV70 420 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 ANKRD37Q7Z713 158 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 NUDT13Q86X67 352 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 C10orf107Q8IVU9 208 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 PRSS58Q8IYP2 241 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 GALNT16Q8N428 558 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 RNF175Q8N4F7 328 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 GBP7Q8N8V2 638 aaPredicted RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 C7orf57Q8NEG2 295 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 ABHD17AQ96GS6 310 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 ARHGAP9Q9BRR9 750 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 TUBB6Q9BUF5 446 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 STMN4Q9H169 189 aaPredicted RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 SLC25A18Q9H1K4 315 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 ATP13A2Q9NQ11 1180 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 LYARQ9NX58 379 aaKnown RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 SIRT5Q9NXA8 310 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 MS4A12Q9NXJ0 267 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 C5AR2Q9P296 337 aa13.16□□□□□ -0.3
GYPC-203ENST00000409836 MRPS33Q9Y291 106 aaKnown RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 SPENQ96T58 3664 aaKnown RBP13.16□□□□□ -0.3
GYPC-203ENST00000409836 A0A0G2JN53 185 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 PSMD12O00232 456 aaPredicted RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 RTCAO00442 366 aaKnown RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 PDYNP01213 254 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 TSPAN8P19075 237 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 NEK2P51955 445 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 RAP1GDS1P52306 607 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 TNFRSF17Q02223 184 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 Q0VFX4 171 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 CHAF1BQ13112 559 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 LY6DQ14210 128 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 AP5B1Q2VPB7 878 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 LACTB2Q53H82 288 aaPredicted RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 JMJD6Q6NYC1 403 aaPredicted RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 GALNT18Q6P9A2 607 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 IGFL2Q6UWQ7 119 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 IGFL3Q6UXB1 125 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 CPEB2Q7Z5Q1 589 aaKnown RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 METTL4Q8N3J2 472 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 CDYL2Q8N8U2 506 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 FDCSPQ8NFU4 85 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 METTL21AQ8WXB1 218 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 TSLPQ969D9 159 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 C8orf44Q96CB5 159 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 TLCD1Q96CP7 247 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 CNDP1Q96KN2 507 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 CSF3RQ99062 836 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 NUDT9Q9BW91 350 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 GATA5Q9BWX5 397 aaPredicted RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 RBCK1Q9BYM8 510 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 FARSBQ9NSD9 589 aaKnown RBP13.15□□□□□ -0.3
GYPC-203ENST00000409836 GPR83Q9NYM4 423 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 PHF11Q9UIL8 331 aa13.15□□□□□ -0.3
GYPC-203ENST00000409836 NSG1A0A0A6YYJ2 146 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 TGFBR3LH3BV60 316 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 BIRC5O15392 142 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 TMPRSS11DO60235 418 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 PRMT3O60678 531 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SPAG7O75391 227 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ZWINTO95229 277 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SERPINA7P05543 415 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 BPGMP07738 259 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 MYZAPP0CAP1 466 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ALDH3A1P30838 453 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SOX11P35716 441 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ARL1P40616 181 aaPredicted RBP13.14□□□□□ -0.31
GYPC-203ENST00000409836 HNRNPFP52597 415 aaKnown RBP13.14□□□□□ -0.31
GYPC-203ENST00000409836 NSDHLQ15738 373 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 TTC19Q6DKK2 380 aaPredicted RBP13.14□□□□□ -0.31
GYPC-203ENST00000409836 TRIM46Q7Z4K8 759 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ARMC10Q8N2F6 343 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 CCNYL1Q8N7R7 359 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 CCDC63Q8NA47 563 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 TMEM52Q8NDY8 209 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SELENOMQ8WWX9 145 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 PSMF1Q92530 271 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 METTL2AQ96IZ6 378 aaKnown RBP13.14□□□□□ -0.31
GYPC-203ENST00000409836 MAPKAP1Q9BPZ7 522 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 SLC25A23Q9BV35 468 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 YIPF2Q9BWQ6 316 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ACPTQ9BZG2 426 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 LHPPQ9H008 270 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 ZNF552Q9H707 407 aaPredicted RBP13.14□□□□□ -0.31
GYPC-203ENST00000409836 TNFRSF12AQ9NP84 129 aa13.14□□□□□ -0.31
GYPC-203ENST00000409836 MID1IP1Q9NPA3 183 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms