RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 CNDP1Q96KN2 507 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 CSF3RQ99062 836 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 HBEGFQ99075 208 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 CENPKQ9BS16 269 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 TRMOQ9BU70 441 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 SEMA4CQ9C0C4 833 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 ZNF700Q9H0M5 742 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 ADNPQ9H2P0 1102 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 TUBD1Q9UJT1 453 aa21.04■□□□□ 0.96
PTCD3-203ENST00000409783 IGKV3D-11A0A0A0MRZ8 115 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 IGHV1-45A0A0A0MS14 117 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 A0A0A6YYD5 115 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 SERTM1A2A2V5 107 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 H3BQF6 201 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 PSMD12O00232 456 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 TM9SF1O15321 606 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 NPHS1O60500 1241 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 CHN1P15882 459 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 HMOX2P30519 316 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ARRB2P32121 409 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 SERPINB4P48594 390 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 SOX8P57073 446 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 EEF1A2Q05639 463 aaKnown RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ZNF33BQ06732 778 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 Q0VFX4 171 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ASPHQ12797 758 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 KCNAB2Q13303 367 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ABRAXAS2Q15018 415 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ZCCHC23Q6ZST2 131 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ANKRD37Q7Z713 158 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 SCUBE1Q8IWY4 988 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 AMER2Q8N7J2 671 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ADAMTS18Q8TE60 1221 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 WDR77Q9BQA1 342 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 MRPL1Q9BYD6 325 aaKnown RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 SHCBP1LQ9BZQ2 653 aa21.03■□□□□ 0.96
PTCD3-203ENST00000409783 STMN4Q9H169 189 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 ARGLU1Q9NWB6 273 aaPredicted RBP21.03■□□□□ 0.96
PTCD3-203ENST00000409783 TGFBR3LH3BV60 316 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 TMPRSS11DO60235 418 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 PRMT3O60678 531 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 ULK1O75385 1050 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 HPP00738 406 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 HSD3B1P14060 373 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 HSD3B2P26439 372 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 CCL11P51671 97 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 GALNT1Q10472 559 aaPredicted RBP21.02■□□□□ 0.96
PTCD3-203ENST00000409783 TBL3Q12788 808 aaKnown RBP21.02■□□□□ 0.96
PTCD3-203ENST00000409783 SLAMF1Q13291 335 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 CES4AQ5XG92 561 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 NDUFAF7Q7L592 441 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 METTL4Q8N3J2 472 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 FAM47BQ8NA70 645 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 METTL21AQ8WXB1 218 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 ARL8AQ96BM9 186 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 ABHD17AQ96GS6 310 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 PKNOX2Q96KN3 472 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 PTCHD1Q96NR3 888 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 MLXIPLQ9NP71 852 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 NECTIN3Q9NQS3 549 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 PRDM9Q9NQV7 894 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 SLC12A4Q9UP95 1085 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 MMACHCQ9Y4U1 282 aa21.02■□□□□ 0.96
PTCD3-203ENST00000409783 TNRC6AQ8NDV7 1962 aaKnown RBP21.02■□□□□ 0.96
PTCD3-203ENST00000409783 IGHV3-20A0A0C4DH32 117 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ZWINTO95229 277 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 CHRNGP07510 517 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 MAOAP21397 527 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 SERPINB3P29508 390 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 HNRNPH2P55795 449 aaKnown RBP21.01■□□□□ 0.95
PTCD3-203ENST00000409783 MAGOHP61326 146 aaKnown RBP21.01■□□□□ 0.95
PTCD3-203ENST00000409783 CSTF3Q12996 717 aaKnown RBP21.01■□□□□ 0.95
PTCD3-203ENST00000409783 NSDHLQ15738 373 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 CPEB2Q7Z5Q1 589 aaKnown RBP21.01■□□□□ 0.95
PTCD3-203ENST00000409783 CUZD1Q86UP6 607 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 NUDT13Q86X67 352 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ZNF595Q8IYB9 648 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 CLEC1AQ8NC01 280 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 VPS50Q96JG6 964 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 IMMP1LQ96LU5 166 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ACPTQ9BZG2 426 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ZNF160Q9HCG1 818 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 KCNK9Q9NPC2 374 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ATP13A2Q9NQ11 1180 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 FBXW2Q9UKT8 454 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ATG4BQ9Y4P1 393 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 ASB4Q9Y574 426 aa21.01■□□□□ 0.95
PTCD3-203ENST00000409783 TLN1Q9Y490 2541 aaKnown RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 TCRBV16S1A1N1A0A5B0 115 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 GOLGA6L10A6NI86 522 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 K7EM74 188 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 BIRC5O15392 142 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 GBAP04062 536 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 TPP2P29144 1249 aaPredicted RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 HSD17B7P56937 341 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 AIMP2Q13155 320 aaKnown RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 RCN2Q14257 317 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 ARL13AQ5H913 290 aaPredicted RBP21■□□□□ 0.95
PTCD3-203ENST00000409783 AGBL2Q5U5Z8 902 aa21■□□□□ 0.95
PTCD3-203ENST00000409783 SCIMPQ6UWF3 145 aa21■□□□□ 0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms