RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 MTFMTQ96DP5 389 aaKnown RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 ZNF717Q9BY31 904 aaPredicted RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 LYRM4Q9HD34 91 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 NECTIN3Q9NQS3 549 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 KCMF1Q9P0J7 381 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 TRPS1Q9UHF7 1281 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 MMACHCQ9Y4U1 282 aa29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 SPENQ96T58 3664 aaKnown RBP29.27■■■□□ 2.28
TRAF3IP1-203ENST00000409739 FASNP49327 2511 aaKnown RBP29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CYR61O00622 381 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 DPM1O60762 260 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 OR4F21O95013 312 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 TSFMP43897 325 aaKnown RBP29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ARFIP1P53367 373 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 IFT88Q13099 833 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CUL3Q13618 768 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 C10orf62Q5T681 223 aaPredicted RBP29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 OR4C11Q6IEV9 310 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PAPD4Q6PIY7 484 aaKnown RBP29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 RIPOR1Q6ZS17 1223 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SCUBE1Q8IWY4 988 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MAPKAP1Q9BPZ7 522 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 GSTO2Q9H4Y5 243 aa29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ZBTB20Q9HC78 741 aaPredicted RBP29.26■■■□□ 2.27
TRAF3IP1-203ENST00000409739 TCRBV16S1A1N1A0A5B0 115 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SLC28A2O43868 658 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 OR4D2P58180 307 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 RCN2Q14257 317 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 AGAP7PQ5VUJ5 663 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PLAG1Q6DJT9 500 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 RBMXL3Q8N7X1 1067 aaKnown RBP29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 BANPQ8N9N5 519 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CCDC63Q8NA47 563 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MYRIPQ8NFW9 859 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 BRIX1Q8TDN6 353 aaKnown RBP29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PSMF1Q92530 271 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 AGAP4Q96P64 663 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ELOVL6Q9H5J4 265 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PRTFDC1Q9NRG1 225 aa29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MRPS33Q9Y291 106 aaKnown RBP29.25■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MLYCDO95822 493 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ITGAMP11215 1152 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ICAM2P13598 275 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CD97P48960 835 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ZNF844Q08AG5 666 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 LCP2Q13094 533 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 NADK2Q4G0N4 442 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 IGFL3Q6UXB1 125 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 GPRIN3Q6ZVF9 776 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ZNF595Q8IYB9 648 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SERPINI1Q99574 410 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 LPAR4Q99677 370 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 FARSBQ9NSD9 589 aaKnown RBP29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 STK38LQ9Y2H1 464 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CLDN16Q9Y5I7 305 aa29.24■■■□□ 2.27
TRAF3IP1-203ENST00000409739 TGFBR3LH3BV60 316 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SEMA3DO95025 777 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CPA3P15088 417 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 HSD17B7P56937 341 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ACTN3Q08043 901 aaPredicted RBP29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 BTBD16Q32M84 506 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 KRT71Q3SY84 523 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SGO1Q5FBB7 561 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ATG14Q6ZNE5 492 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ZCCHC7Q8N3Z6 543 aaKnown RBP29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CCNYL1Q8N7R7 359 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CDYL2Q8N8U2 506 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ARMC2Q8NEN0 867 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SNX6Q9UNH7 406 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PLLPQ9Y342 182 aa29.23■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CLDN4O14493 209 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PLA2G2AP14555 144 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 BSGP35613 385 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CASRP41180 1078 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 DNAJB13P59910 316 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 AP2B1P63010 937 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 JMJD6Q6NYC1 403 aaPredicted RBP29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 IGFL2Q6UWQ7 119 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SIRT6Q8N6T7 355 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SLC29A3Q9BZD2 475 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 IQCGQ9H095 443 aaKnown RBP29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 EPN3Q9H201 632 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 OXSMQ9NWU1 459 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MID2Q9UJV3 735 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 FBXW2Q9UKT8 454 aa29.22■■■□□ 2.27
TRAF3IP1-203ENST00000409739 A0A0A6YYD5 115 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 EEDO75530 441 aaKnown RBP29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PDYNP01213 254 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SOX11P35716 441 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SLC13A2Q13183 592 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SLAMF1Q13291 335 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 PCLAFQ15004 111 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 EXT1Q16394 746 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CRB2Q5IJ48 1285 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 TCHHL1Q5QJ38 904 aaPredicted RBP29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 ISLR2Q6UXK2 745 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 CLNKQ7Z7G1 428 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 SELENOMQ8WWX9 145 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 TM9SF4Q92544 642 aa29.21■■■□□ 2.27
TRAF3IP1-203ENST00000409739 MFRPQ9BY79 579 aa29.21■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms