RNA–Protein interactions for RNA: ENST00000409593.5

PMS1-203, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 1 (best)

Gene PMS1, Length 1,668 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-203ENST00000409593 UBQLN2Q9UHD9 624 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 ITGA11Q9UKX5 1188 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 VSIG4Q9Y279 399 aa3.15□□□□□ -1.9
PMS1-203ENST00000409593 SALL1Q9NSC2 1324 aa3.15□□□□□ -1.91
PMS1-203ENST00000409593 ILVBLA1L0T0 632 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 YDJCA8MPS7 323 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 KLLNB2CW77 178 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 KBTBD13C9JR72 458 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 CTDSPLO15194 276 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 ST8SIA3O43173 380 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TIMM44O43615 452 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 RPS27AP62979 156 aaKnown RBP3.14□□□□□ -1.91
PMS1-203ENST00000409593 ZNF506Q5JVG8 444 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 PM20D1Q6GTS8 502 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 NEPROQ6NW34 567 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 FAM47EQ6ZV65 393 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TBC1D10CQ8IV04 446 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 KLHL7Q8IXQ5 586 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TMEM99Q8N816 258 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 OR1B1Q8NGR6 318 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 OR6F1Q8NGZ6 308 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 ITLN1Q8WWA0 313 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 SEPT8Q92599 483 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 RFT1Q96AA3 541 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 RCHY1Q96PM5 261 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 ATG101Q9BSB4 218 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 NMUR1Q9HB89 426 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 S100A14Q9HCY8 104 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TMED7Q9Y3B3 224 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TRBV5-4A0A0C4DH59 114 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 ANKDD1BA6NHY2 528 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 OR6B1O95007 311 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 FGF19O95750 216 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 LYNP07948 512 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 FAM200BP0CF97 657 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 KLK2P20151 261 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 SPRP35270 261 aaPredicted RBP3.14□□□□□ -1.91
PMS1-203ENST00000409593 ELK3P41970 407 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 SCN1BQ07699 218 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 RUNX3Q13761 415 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 FASTKQ14296 549 aaKnown RBP3.14□□□□□ -1.91
PMS1-203ENST00000409593 LYPLAL1Q5VWZ2 237 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TMEM64Q6YI46 380 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 HIPK1Q86Z02 1210 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 LRRC49Q8IUZ0 686 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 RNF149Q8NC42 400 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 KLHL30-AS1Q8NEE0 82 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 GPR148Q8TDV2 347 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 SNRNP27Q8WVK2 155 aaKnown RBP3.14□□□□□ -1.91
PMS1-203ENST00000409593 PCNPQ8WW12 178 aaKnown RBP3.14□□□□□ -1.91
PMS1-203ENST00000409593 ERO1AQ96HE7 468 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 SERAC1Q96JX3 654 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 TRIM7Q9C029 511 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 MED17Q9NVC6 651 aa3.14□□□□□ -1.91
PMS1-203ENST00000409593 NIP7Q9Y221 180 aaKnown RBP eCLIP3.14□□□□□ -1.91
PMS1-203ENST00000409593 TEX48A0A1B0GUV7 120 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 TBCAO75347 108 aaKnown RBP3.13□□□□□ -1.91
PMS1-203ENST00000409593 SIX3O95343 332 aaPredicted RBP3.13□□□□□ -1.91
PMS1-203ENST00000409593 SEMA4FO95754 770 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 THY1P04216 161 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 KRTAP1-4P0C5Y4 121 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 KRT3P12035 628 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 ACKR3P25106 362 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 FKBP1BP68106 108 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 GPR50Q13585 617 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 CYLC2Q14093 348 aaPredicted RBP3.13□□□□□ -1.91
PMS1-203ENST00000409593 PSMD6Q15008 389 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 NHLRC3Q5JS37 347 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 ZNF776Q68DI1 518 aaPredicted RBP3.13□□□□□ -1.91
PMS1-203ENST00000409593 BAIAP2L2Q6UXY1 529 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 UXS1Q8NBZ7 420 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 EDEM3Q9BZQ6 932 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 CLEC5AQ9NY25 188 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 ETV7Q9Y603 341 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 CPQQ9Y646 472 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 PFASO15067 1338 aa3.13□□□□□ -1.91
PMS1-203ENST00000409593 WDR46O15213 610 aaKnown RBP3.12□□□□□ -1.91
PMS1-203ENST00000409593 P2RX6O15547 441 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 CLN5O75503 358 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 VENTXO95231 258 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 HSPA4LO95757 839 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 IGHG1P01857 330 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 HSP90AA1P07900 732 aaKnown RBP3.12□□□□□ -1.91
PMS1-203ENST00000409593 CCND3P30281 292 aaPredicted RBP3.12□□□□□ -1.91
PMS1-203ENST00000409593 KCNJ1P48048 391 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 SLC1A6P48664 564 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 PTK6Q13882 451 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 PLPP4Q5VZY2 271 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 NUFIP2Q7Z417 695 aaKnown RBP3.12□□□□□ -1.91
PMS1-203ENST00000409593 SERINC5Q86VE9 423 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 NLRP14Q86W24 1093 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 CKAP2Q8WWK9 683 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 APOL2Q9BQE5 337 aa3.12□□□□□ -1.91
PMS1-203ENST00000409593 PRRC2AP48634 2157 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 LETM1O95202 739 aaPredicted RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 HCKP08631 526 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 ANPEPP15144 967 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 EZRP15311 586 aaKnown RBP3.11□□□□□ -1.91
PMS1-203ENST00000409593 IFNAR1P17181 557 aa3.11□□□□□ -1.91
PMS1-203ENST00000409593 GJB2P29033 226 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms