RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 PARP15Q460N3 678 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SPDYE7PQ495Y7 208 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 AGKQ53H12 422 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SPANXN3Q5MJ09 141 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CACHD1Q5VU97 1274 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 NAPRTQ6XQN6 538 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 STRADAQ7RTN6 431 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 KRT73Q86Y46 540 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SNX29P2Q8IUI4 249 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 BRSK2Q8IWQ3 736 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GPALPP1Q8IXQ4 340 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ADGRF4Q8IZF3 695 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 RBFAQ8N0V3 343 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP5.24□□□□□ -1.57
CLK1-202ENST00000409403 TTC9BQ8N6N2 239 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CHDHQ8NE62 594 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 VANGL1Q8TAA9 524 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 ENKURQ8TC29 256 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 BPIFB1Q8TDL5 484 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DEDD2Q8WXF8 326 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SEMA4DQ92854 862 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TUBGCP3Q96CW5 907 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 LGALS12Q96DT0 336 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CCDC126Q96EE4 140 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PDXPQ96GD0 296 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MARK4Q96L34 752 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CYP2S1Q96SQ9 504 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 HSD17B14Q9BPX1 270 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 RBM4BQ9BQ04 359 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 TTYH2Q9BSA4 534 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 RBM4Q9BWF3 364 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 GATA5Q9BWX5 397 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 CCDC90BQ9GZT6 254 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DCSTAMPQ9H295 470 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TMEM245Q9H330 911 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SYNDIG1Q9H7V2 258 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 DYRK4Q9NR20 520 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 EIF2B3Q9NR50 452 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 RBAKQ9NYW8 714 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 MAT2BQ9NZL9 334 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 EHD3Q9NZN3 535 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MBD2Q9UBB5 411 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 OPTCQ9UBM4 332 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PHF11Q9UIL8 331 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZNF112Q9UJU3 913 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GMEB2Q9UKD1 530 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TLK1Q9UKI8 766 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MAFFQ9ULX9 164 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ERVW-1Q9UQF0 538 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 LYVE1Q9Y5Y7 322 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SESN1Q9Y6P5 492 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TET1Q8NFU7 2136 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MYO10Q9HD67 2058 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PTPRJQ12913 1337 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 A0A1B0GVM2 712 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 MARCH11A6NNE9 402 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 F5H697 171 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 F8VP50 259 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 F8W810 466 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 G3V2L1 256 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 H0YCG3 227 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 K7ESM1 405 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SDHDO14521 159 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ARPC2O15144 300 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 KCNN4O15554 427 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SH3BP5O60239 455 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PIAS2O75928 621 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 OR2B3O76000 313 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 NCR1O76036 304 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZFPL1O95159 310 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CLIC3O95833 236 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TGM6O95932 706 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GOT2P00505 430 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 PGK1P00558 417 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 IFNA14P01570 189 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ALPLP05186 524 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 POLBP06746 335 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TGFB3P10600 412 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SPNP16150 400 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZNF30P17039 623 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PSMB9P28065 219 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ARRB2P32121 409 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 SHMT2P34897 504 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 GYG1P46976 350 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PPM1FP49593 454 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 LIMK2P53671 638 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 EEFSECP57772 596 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 YWHAEP62258 255 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 FAM189BP81408 668 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 FLI1Q01543 452 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 PLP2Q04941 152 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CYP24A1Q07973 514 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 PRPSAP1Q14558 356 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ZNF750Q32MQ0 723 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 TIMM50Q3ZCQ8 353 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 CD300EQ496F6 205 aaPredicted RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 FBXO43Q4G163 708 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 FAM98BQ52LJ0 330 aaKnown RBP5.24□□□□□ -1.57
CLK1-202ENST00000409403 FBLN7Q53RD9 439 aa5.24□□□□□ -1.57
CLK1-202ENST00000409403 ALFQ53S48 1182 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms