RNA–Protein interactions for RNA: ENST00000409025.5

USP39-202, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5 BASIC

Gene USP39, Length 1,946 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-202ENST00000409025 CARM1Q86X55 608 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 RNF130Q86XS8 419 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 DCP2Q8IU60 420 aaKnown RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 ZDHHC13Q8IUH4 622 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 OR10Q1Q8NGQ4 319 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 MAL2Q969L2 176 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 ZBED6CLQ96FA7 236 aaPredicted RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 NELL2Q99435 816 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 ANKRD60Q9BZ19 345 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 CXorf36Q9H7Y0 433 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 NEUROD4Q9HD90 331 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 SMPD3Q9NY59 655 aaPredicted RBP18.02■□□□□ 0.48
USP39-202ENST00000409025 SNX8Q9Y5X2 465 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 TRIOBPQ9H2D6 2365 aa18.02■□□□□ 0.48
USP39-202ENST00000409025 FAM221BA6H8Z2 402 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 DPPA5A6NC42 116 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 TNFSF14O43557 240 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 CELA2BP08218 269 aaPredicted RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 ATP5A1P25705 553 aaKnown RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 FRKP42685 505 aaPredicted RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 MAGEA2P43356 314 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 PRIM2P49643 509 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 PCBP4P57723 403 aaKnown RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 UBE2IP63279 158 aaKnown RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 MERTKQ12866 999 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 SPIDRQ14159 915 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 SLC5A12Q1EHB4 618 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 OTUD3Q5T2D3 398 aaPredicted RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 NDUFAF5Q5TEU4 345 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 TBPL2Q6SJ96 375 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 TRIM73Q86UV7 250 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 ZDHHC21Q8IVQ6 265 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 SVOPLQ8N434 492 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 ACOT4Q8N9L9 421 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 OR8K5Q8NH50 307 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 ADI1Q9BV57 179 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 ASPSCR1Q9BZE9 553 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 SLAMF7Q9NQ25 335 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 TAS2R7Q9NYW3 318 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 EHD3Q9NZN3 535 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 C5AR2Q9P296 337 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 APOBEC3BQ9UH17 382 aaKnown RBP18.02■□□□□ 0.47
USP39-202ENST00000409025 MAP4K5Q9Y4K4 846 aa18.02■□□□□ 0.47
USP39-202ENST00000409025 OR2A25A4D2G3 310 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 C4orf51C9J302 202 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 G3V2T6 193 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 TNFAIP8O95379 198 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 CASP9P55211 416 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 RGS1Q08116 209 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 GALNT10Q86SR1 603 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 ASPGQ86U10 573 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 STK32CQ86UX6 486 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 SLC37A2Q8TED4 501 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 TMEM38AQ9H6F2 299 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 C1GALT1Q9NS00 363 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 ACSS1Q9NUB1 689 aaPredicted RBP18.01■□□□□ 0.47
USP39-202ENST00000409025 ADPRHL2Q9NX46 363 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 ANKMY1Q9P2S6 941 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 PCDHGB5Q9Y5G0 923 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 ENTPD2Q9Y5L3 495 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 SLCO1B1Q9Y6L6 691 aa18.01■□□□□ 0.47
USP39-202ENST00000409025 MDC1Q14676 2089 aaKnown RBP18■□□□□ 0.47
USP39-202ENST00000409025 ARHGEF17Q96PE2 2063 aaPredicted RBP18■□□□□ 0.47
USP39-202ENST00000409025 C2orf74A8MZ97 194 aa18■□□□□ 0.47
USP39-202ENST00000409025 AXIN1O15169 862 aa18■□□□□ 0.47
USP39-202ENST00000409025 FKBP9O95302 570 aa18■□□□□ 0.47
USP39-202ENST00000409025 MAGP20916 626 aa18■□□□□ 0.47
USP39-202ENST00000409025 CD27P26842 260 aa18■□□□□ 0.47
USP39-202ENST00000409025 ALDH3A2P51648 485 aa18■□□□□ 0.47
USP39-202ENST00000409025 ARSFP54793 590 aa18■□□□□ 0.47
USP39-202ENST00000409025 DAG1Q14118 895 aa18■□□□□ 0.47
USP39-202ENST00000409025 MYBPC3Q14896 1274 aa18■□□□□ 0.47
USP39-202ENST00000409025 OR52E8Q6IFG1 317 aa18■□□□□ 0.47
USP39-202ENST00000409025 MRM1Q6IN84 353 aaKnown RBP18■□□□□ 0.47
USP39-202ENST00000409025 KRT80Q6KB66 452 aa18■□□□□ 0.47
USP39-202ENST00000409025 NT5CQ8TCD5 201 aa18■□□□□ 0.47
USP39-202ENST00000409025 HSH2DQ96JZ2 352 aa18■□□□□ 0.47
USP39-202ENST00000409025 EPS8L2Q9H6S3 715 aa18■□□□□ 0.47
USP39-202ENST00000409025 SYNPO2LQ9H987 977 aa18■□□□□ 0.47
USP39-202ENST00000409025 IL1RAPQ9NPH3 570 aa18■□□□□ 0.47
USP39-202ENST00000409025 ASB4Q9Y574 426 aa18■□□□□ 0.47
USP39-202ENST00000409025 METTL12A8MUP2 240 aa18■□□□□ 0.47
USP39-202ENST00000409025 JUNDP17535 347 aa18■□□□□ 0.47
USP39-202ENST00000409025 RAB8AP61006 207 aa18■□□□□ 0.47
USP39-202ENST00000409025 MYBPC1Q00872 1141 aa18■□□□□ 0.47
USP39-202ENST00000409025 HSPB3Q12988 150 aa18■□□□□ 0.47
USP39-202ENST00000409025 C1orf61Q13536 156 aa18■□□□□ 0.47
USP39-202ENST00000409025 SCARB2Q14108 478 aa18■□□□□ 0.47
USP39-202ENST00000409025 FBXO42Q6P3S6 717 aa18■□□□□ 0.47
USP39-202ENST00000409025 FIGLAQ6QHK4 219 aa18■□□□□ 0.47
USP39-202ENST00000409025 VN1R4Q7Z5H5 301 aa18■□□□□ 0.47
USP39-202ENST00000409025 APLFQ8IW19 511 aaPredicted RBP18■□□□□ 0.47
USP39-202ENST00000409025 SIX5Q8N196 739 aa18■□□□□ 0.47
USP39-202ENST00000409025 DHRSXQ8N5I4 330 aa18■□□□□ 0.47
USP39-202ENST00000409025 DEFB119Q8N690 84 aa18■□□□□ 0.47
USP39-202ENST00000409025 OR5K1Q8NHB7 308 aa18■□□□□ 0.47
USP39-202ENST00000409025 BAG5Q9UL15 447 aa18■□□□□ 0.47
USP39-202ENST00000409025 EYSQ5T1H1 3165 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 SUV39H1O43463 412 aa17.99■□□□□ 0.47
USP39-202ENST00000409025 E2F6O75461 281 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms