RNA–Protein interactions for RNA: ENST00000406454.7

CACNA1C-222, Transcript of calcium voltage-gated channel subunit alpha1 C, human

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1C, Length 7,590 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA1C-222	ENST00000406454	EHD1	Q9H4M9	534 aa		12.79	□□□□□ -0.36
CACNA1C-222	ENST00000406454	CCDC59	Q9P031	241 aa	Known RBP	12.79	□□□□□ -0.36
CACNA1C-222	ENST00000406454	CYP8B1	Q9UNU6	501 aa		12.79	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SPO11	Q9Y5K1	396 aa		12.79	□□□□□ -0.36
CACNA1C-222	ENST00000406454	KCNC1	P48547	511 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TUBA3E	Q6PEY2	450 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TCEAL8	Q8IYN2	117 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	PIP5K1A	Q99755	562 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SPATA9	Q9BWV2	254 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	PRTFDC1	Q9NRG1	225 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454		A0A1W2PPW3	197 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	C1orf226	A1L170	272 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	FAAH	O00519	579 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	KDELC1	Q6UW63	502 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	DMRTB1	Q96MA1	342 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	BLOC1S5-TXNDC5	H3BN57	136 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	KLK3	P07288	261 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SRC	P12931	536 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	ELK4	P28324	431 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	RAB2A	P61019	212 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	WSCD2	Q2TBF2	565 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	ZNF404	Q494X3	552 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SCML4	Q8N228	414 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TMEM156	Q8N614	296 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TM9SF2	Q99805	663 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454		A0A1W2PRG6	482 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	IGLON5	A6NGN9	336 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	EMC8	O43402	210 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	C7	P10643	843 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	NR2C1	P13056	603 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	BMPR1A	P36894	532 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	HTR6	P50406	440 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	C18orf21	Q32NC0	220 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TMEM25	Q86YD3	366 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SDR16C5	Q8N3Y7	309 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TOMM5	Q8N4H5	51 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	LIN28A	Q9H9Z2	209 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	MOV10	Q9HCE1	1003 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	AKR1D1	P51857	326 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	GTPBP2	Q9BX10	602 aa	Known RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	RUNX3	Q13761	415 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	FAM214A	Q32MH5	1076 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	DPH7	Q9BTV6	452 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	B3GNT4	Q9C0J1	378 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	GPRC5B	Q9NZH0	403 aa		12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	C19orf25	Q9UFG5	118 aa	Predicted RBP	12.78	□□□□□ -0.36
CACNA1C-222	ENST00000406454	OR5K4	A6NMS3	321 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	CLU	P10909	449 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	HSD11B1	P28845	292 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	OR3A3	P47888	321 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	OR3A2	P47893	321 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	TAS2R43	P59537	309 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	RPS3A	P61247	264 aa	Known RBP	12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	MLLT1	Q03111	559 aa	Predicted RBP	12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	MSANTD1	Q6ZTZ1	278 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	GOLM1	Q8NBJ4	401 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	METTL7A	Q9H8H3	244 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	RNF121	Q9H920	327 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	IL21R	Q9HBE5	538 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	GRHPR	Q9UBQ7	328 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	ACTL7A	Q9Y615	435 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	EIF3F	O00303	357 aa	Predicted RBP	12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	VIPR2	P41587	438 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	EXOC3L2	Q2M3D2	409 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	SETD6	Q8TBK2	473 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	PPP1R14B	Q96C90	147 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	BARD1	Q99728	777 aa	Known RBP	12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	PRODH2	Q9UF12	536 aa		12.77	□□□□□ -0.36
CACNA1C-222	ENST00000406454	OR6C74	A6NCV1	312 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	XPNPEP2	O43895	674 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	RPS3	P23396	243 aa	Known RBP eCLIP	12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	ADAM17	P78536	824 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	MOG	Q16653	247 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	ZNF789	Q5FWF6	425 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	MARCH8	Q5T0T0	291 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	NUP43	Q8NFH3	380 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	FANK1	Q8TC84	345 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	JPH3	Q8WXH2	748 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	MMAB	Q96EY8	250 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	SEC61A2	Q9H9S3	476 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454		J3QRK9	145 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	FOSL1	P15407	271 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	SLC6A9	P48067	706 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	SLAMF1	Q13291	335 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	CHST14	Q8NCH0	376 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	HUS1B	Q8NHY5	278 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	FBXL8	Q96CD0	374 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	RBCK1	Q9BYM8	510 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	SCAMP2	O15127	329 aa	Known RBP	12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	FLYWCH1	Q4VC44	716 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	KDM1B	Q8NB78	822 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	OR2L3	Q8NG85	312 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	CNIH3	Q8TBE1	160 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	THEM6	Q8WUY1	208 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	DNAJA4	Q8WW22	397 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	CITED4	Q96RK1	184 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	GNG8	Q9UK08	70 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	CLPX	O76031	633 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	DHRS4L1	P0CG22	281 aa		12.77	□□□□□ -0.37
CACNA1C-222	ENST00000406454	SLC15A1	P46059	708 aa		12.77	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 41 ms