RNA–Protein interactions for RNA: ENST00000404321.3

PTPRN2-204, Transcript of protein tyrosine phosphatase, receptor type N2, humanhuman

TSL 5 BASIC

Gene PTPRN2, Length 1,374 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN2-204ENST00000404321 STX16-NPEPL1H3BU86 382 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CYR61O00622 381 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CLDN4O14493 209 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 STX16O14662 325 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CLDN9O95484 217 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 PYGBP11216 843 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 HIST1H1TP22492 207 aaPredicted RBP17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 TNFSF10P50591 281 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CCNG1P51959 295 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CDH13P55290 713 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 MRPL49Q13405 166 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 NR6A1Q15406 480 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 ACER2Q5QJU3 275 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 DEPDC1Q5TB30 811 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 CRLF3Q8IUI8 442 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 SCUBE1Q8IWY4 988 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 BEST3Q8N1M1 668 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 EIF1ADQ8N9N8 165 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 L3MBTL4Q8NA19 623 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 SRFBP1Q8NEF9 429 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 NPAS2Q99743 824 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 ROGDIQ9GZN7 287 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 ZBTB26Q9HCK0 441 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 ANKRD10Q9NXR5 420 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 KCMF1Q9P0J7 381 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 TEKT2Q9UIF3 430 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 FBXW2Q9UKT8 454 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 TMCO1Q9UM00 188 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 MRPS33Q9Y291 106 aaKnown RBP17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 MMACHCQ9Y4U1 282 aa17.02■□□□□ 0.31
PTPRN2-204ENST00000404321 A0A1W2PPM1 405 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 SAGE2PA6NJ88 616 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 H0YIV9 168 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 PPP6CO00743 305 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 UGDHO60701 494 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 MYO1DO94832 1006 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 ETHE1O95571 254 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 PIK3CBP42338 1070 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 TSFMP43897 325 aaKnown RBP17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 PHEXP78562 749 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 ID2Q02363 134 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 OR4C11Q6IEV9 310 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 ADAMTS18Q8TE60 1221 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 MZB1Q8WU39 189 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 SREK1Q8WXA9 508 aaKnown RBP17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 HAS2Q92819 552 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 REPS1Q96D71 796 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 ADGRE2Q9UHX3 823 aa17.01■□□□□ 0.31
PTPRN2-204ENST00000404321 A0A1B0GTL3 188 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 PLPP1O14494 284 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 RPS17P08708 135 aaKnown RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 TNFRSF8P28908 595 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 HSD17B7P56937 341 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 TAS2R50P59544 299 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 SRSF11Q05519 484 aaKnown RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 TRAF3Q13114 568 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 SLAMF1Q13291 335 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 SGO1Q5FBB7 561 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 TTC19Q6DKK2 380 aaPredicted RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 H3F3CQ6NXT2 135 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 METTL2BQ6P1Q9 378 aaKnown RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF595Q8IYB9 648 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 SLC5A8Q8N695 610 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 NFAM1Q8NET5 270 aaPredicted RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 OR4F6Q8NGB9 312 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 EPS8L3Q8TE67 593 aaKnown RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 GRHL3Q8TE85 626 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 RGMAQ96B86 450 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF354BQ96LW1 612 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 CENPKQ9BS16 269 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 SLC29A3Q9BZD2 475 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 LYRM4Q9HD34 91 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 FETUBQ9UGM5 382 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 NOL12Q9UGY1 213 aaKnown RBP eCLIP17■□□□□ 0.31
PTPRN2-204ENST00000404321 CLDN16Q9Y5I7 305 aa17■□□□□ 0.31
PTPRN2-204ENST00000404321 V9GYY5 206 aaPredicted RBP17■□□□□ 0.31
PTPRN2-204ENST00000404321 CNTRLQ7Z7A1 2325 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 TRAV17A0A0B4J275 112 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 OR5H15A6NDH6 313 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 LDB3O75112 727 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 IFNA16P05015 189 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 CPN2P22792 545 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 PTX3P26022 381 aaPredicted RBP16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 VSNL1P62760 191 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 RCN2Q14257 317 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 MEP1AQ16819 746 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 MILR1Q7Z6M3 343 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 WDR20Q8TBZ3 569 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 ELP5Q8TE02 316 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 TRPC4APQ8TEL6 797 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 ZNF483Q8TF39 744 aaPredicted RBP16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 CDCP1Q9H5V8 836 aa16.99■□□□□ 0.31
PTPRN2-204ENST00000404321 TRBV11-1A0A0K0K1C0 115 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 GABRR3A8MPY1 467 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 DLX3O60479 287 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 CTNSO60931 367 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 EEDO75530 441 aaKnown RBP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 PRKRAO75569 313 aaKnown RBP16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 SCELO95171 688 aa16.98■□□□□ 0.31
PTPRN2-204ENST00000404321 TAC1P20366 129 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms