RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 MRPS33Q9Y291 106 aaKnown RBP14.35□□□□□ -0.11
TPM1-207ENST00000403994 OTOGQ6ZRI0 2925 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 CYR61O00622 381 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 FCHO1O14526 889 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 SLC19A2O60779 497 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 TRHRP34981 398 aaPredicted RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 CASP2P42575 452 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 CYB561P49447 251 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 CLCN2P51788 898 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 ALDH6A1Q02252 535 aaKnown RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 RBPJQ06330 500 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 TGM3Q08188 693 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 SLC13A2Q13183 592 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 LAPTM5Q13571 262 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 ZNF800Q2TB10 664 aaPredicted RBP eCLIP14.34□□□□□ -0.119e-6■■■■□ 24.9
TPM1-207ENST00000403994 UBAP2Q5T6F2 1119 aaKnown RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 UBE3DQ7Z6J8 389 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 ZNF473Q8WTR7 871 aaKnown RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 THAP3Q8WTV1 239 aaPredicted RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 KCTD4Q8WVF5 259 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 NCLNQ969V3 563 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 VMP1Q96GC9 406 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 CCDC120Q96HB5 630 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 MAGED4Q96JG8 741 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 C16orf45Q96MC5 204 aaPredicted RBP14.34□□□□□ -0.11
TPM1-207ENST00000403994 ADAP2Q9NPF8 381 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 OPTCQ9UBM4 332 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 SH3BGRL2Q9UJC5 107 aa14.34□□□□□ -0.11
TPM1-207ENST00000403994 CACNA1CQ13936 2221 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 A0A087X1B8 175 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 HMX2A2RU54 273 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 K7EPI3 171 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 CLDN4O14493 209 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 MTHFD2P13995 350 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 ZNF24P17028 368 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 HLCSP50747 726 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 HIST2H2ACQ16777 129 aaPredicted RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 HIST2H2AA3Q6FI13 130 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 SLC25A25Q6KCM7 469 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 PNPLA5Q7Z6Z6 429 aaPredicted RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 LAS2Q8IYD9 372 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 CPSF7Q8N684 471 aaKnown RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 FAM98AQ8NCA5 519 aaKnown RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 ITLN2Q8WWU7 325 aaPredicted RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 NXNL1Q96CM4 212 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 LRRC1Q9BTT6 524 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 LYRM4Q9HD34 91 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 PRDM7Q9NQW5 492 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 SNX15Q9NRS6 342 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 SUCOQ9UBS9 1254 aaKnown RBP14.33□□□□□ -0.12
TPM1-207ENST00000403994 FBXW2Q9UKT8 454 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 ACOT9Q9Y305 439 aa14.33□□□□□ -0.12
TPM1-207ENST00000403994 CREBBPQ92793 2442 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 SYNDIG1LA6NDD5 238 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 SYCE1LA8MT33 242 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 NPIPA5E9PKD4 350 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 RTCAO00442 366 aaKnown RBP14.32□□□□□ -0.12
TPM1-207ENST00000403994 CCL21O00585 134 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 PRKNO60260 465 aaPredicted RBP14.32□□□□□ -0.12
TPM1-207ENST00000403994 ITGA10O75578 1167 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 SCELO95171 688 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 MLYCDO95822 493 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 PCNAP12004 261 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 SERPINB1P30740 379 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 GPR143P51810 404 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 PCDH1Q08174 1060 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 RCN2Q14257 317 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 NAA30Q147X3 362 aaPredicted RBP14.32□□□□□ -0.12
TPM1-207ENST00000403994 ELAVL1Q15717 326 aaKnown RBP14.32□□□□□ -0.12
TPM1-207ENST00000403994 MAPKAPK3Q16644 382 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 RNFT1Q5M7Z0 435 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 MROH9Q5TGP6 573 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 GRHL2Q6ISB3 625 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 MED27Q6P2C8 311 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 CCDC91Q7Z6B0 441 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 CYP4Z2PQ8N1L4 340 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 OR7G3Q8NG95 312 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 RHEBL1Q8TAI7 183 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 UBE2E3Q969T4 207 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 TMEM125Q96AQ2 219 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 MRRFQ96E11 262 aaKnown RBP14.32□□□□□ -0.12
TPM1-207ENST00000403994 MAPKAP1Q9BPZ7 522 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 ROGDIQ9GZN7 287 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 ACSS3Q9H6R3 686 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 NINJ2Q9NZG7 142 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 KCMF1Q9P0J7 381 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 TINAGQ9UJW2 476 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 NPIPA1Q9UND3 350 aa14.32□□□□□ -0.12
TPM1-207ENST00000403994 CSMD2Q7Z408 3487 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 SH3BGRLO75368 114 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 ALDOAP04075 364 aaKnown RBP14.31□□□□□ -0.12
TPM1-207ENST00000403994 C2P06681 752 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 EPB42P16452 691 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 HIST1H1TP22492 207 aaPredicted RBP14.31□□□□□ -0.12
TPM1-207ENST00000403994 ATP5A1P25705 553 aaKnown RBP14.31□□□□□ -0.12
TPM1-207ENST00000403994 SSR2P43308 183 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 SERPINB8P50452 374 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 GTF3C1Q12789 2109 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 SETDB1Q15047 1291 aa14.31□□□□□ -0.12
TPM1-207ENST00000403994 UAP1Q16222 522 aaPredicted RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms