RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 FAM219BQ5XKK7 198 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 PLAG1Q6DJT9 500 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 ABHD17CQ6PCB6 329 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CLEC18BQ6UXF7 455 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 LRRC70Q7Z2Q7 622 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 UBE3DQ7Z6J8 389 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CLNKQ7Z7G1 428 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 MYLK4Q86YV6 388 aaPredicted RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 RELL1Q8IUW5 271 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 BEST3Q8N1M1 668 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 TEX9Q8N6V9 391 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 FAM47BQ8NA70 645 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CLEC18CQ8NCF0 446 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 TMEM52Q8NDY8 209 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 PLPP5Q8NEB5 264 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 GRHL3Q8TE85 626 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 UBTD2Q8WUN7 234 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 DCAKDQ8WVC6 231 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 SLC44A1Q8WWI5 657 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 SREK1Q8WXA9 508 aaKnown RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 GAL3ST3Q96A11 431 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 WDR34Q96EX3 536 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 PTCD3Q96EY7 689 aaKnown RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 FAR2Q96K12 515 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 LMF1Q96S06 567 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CSF3RQ99062 836 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 PAFAH2Q99487 392 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 LPAR4Q99677 370 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 NPAS2Q99743 824 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 MDFIQ99750 246 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 EFCAB11Q9BUY7 163 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 SORBS1Q9BX66 1292 aaKnown RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CAPS2Q9BXY5 557 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 MS4A8Q9BY19 250 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 FUT8Q9BYC5 575 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 EHD1Q9H4M9 534 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 NT5DC2Q9H857 520 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 KCNK13Q9HB14 408 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 ANKRD10Q9NXR5 420 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 NOP53Q9NZM5 478 aaKnown RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 CPSF2Q9P2I0 782 aaKnown RBP5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 OPTCQ9UBM4 332 aa5.41□□□□□ -1.54
HMGB1P20-201ENST00000402555 IGKV3D-11A0A0A0MRZ8 115 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 DYTNA2CJ06 578 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 BLACEA4D250 179 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 E2F3O00716 465 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PCDH17O14917 1159 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 B3GALT2O43825 422 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 AGFG2O95081 481 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CBX6O95503 412 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TGFB1P01137 390 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CYC1P08574 325 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ICAM2P13598 275 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 EPB42P16452 691 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 IL10P22301 178 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 JAK1P23458 1154 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 MAGEA12P43365 314 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PIK3CGP48736 1102 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TNFSF10P50591 281 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 RAB38P57729 211 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 SLC26A5P58743 744 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PMP22Q01453 160 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ID2Q02363 134 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 GTF2H2Q13888 395 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 NAA30Q147X3 362 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 SETDB1Q15047 1291 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ACAP2Q15057 778 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TBCCQ15814 346 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 EXT1Q16394 746 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 HIST2H2ACQ16777 129 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ADPRMQ3LIE5 342 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 GLE1Q53GS7 698 aaKnown RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TECRLQ5HYJ1 363 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PAGE2BQ5JRK9 111 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ACER2Q5QJU3 275 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 FHL5Q5TD97 284 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ABHD17BQ5VST6 288 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 HIST2H2BCQ6DN03 193 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 HIST2H2AA3Q6FI13 130 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 NIPAL1Q6NVV3 410 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 GTF2H2CQ6P1K8 395 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TRIM40Q6P9F5 258 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 MYO7BQ6PIF6 2116 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ZNF793Q6ZN11 406 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 QSOX2Q6ZRP7 698 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CEP128Q6ZU80 1094 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 RPS27LQ71UM5 84 aaKnown RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 GOLGA7Q7Z5G4 137 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CRLF3Q8IUI8 442 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 FAM26EQ8N5C1 309 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 CEP112Q8N8E3 955 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 PTGR2Q8N8N7 351 aaPredicted RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TTLQ8NG68 377 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 OR2L5Q8NG80 312 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 OR7G3Q8NG95 312 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 RHEBL1Q8TAI7 183 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 M1APQ8TC57 530 aa5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 ZNF473Q8WTR7 871 aaKnown RBP5.4□□□□□ -1.54
HMGB1P20-201ENST00000402555 TRIM44Q96DX7 344 aaPredicted RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms