RNA–Protein interactions for RNA: ENST00000401617.6

CLIP4-203, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 5 BASIC

Gene CLIP4, Length 2,162 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-203ENST00000401617 CYP8B1Q9UNU6 501 aa11.66□□□□□ -0.54
CLIP4-203ENST00000401617 ASB4Q9Y574 426 aa11.66□□□□□ -0.54
CLIP4-203ENST00000401617 PCDHGA2Q9Y5H1 932 aa11.66□□□□□ -0.54
CLIP4-203ENST00000401617 KNL1Q8NG31 2342 aa11.66□□□□□ -0.54
CLIP4-203ENST00000401617 TDRD6O60522 2096 aaKnown RBP11.66□□□□□ -0.54
CLIP4-203ENST00000401617 CCDC88CQ9P219 2028 aa11.66□□□□□ -0.54
CLIP4-203ENST00000401617 SPTY2D1-AS1A0A0U1RR47 76 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 A0A1W2PPC1 479 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 OR2A25A4D2G3 310 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 NOBOXO60393 691 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 PABPC4LP0CB38 370 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ARAFP10398 606 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 THRBP10828 461 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SSR2P43308 183 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 KCNJ10P78508 379 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ILF3Q12906 894 aaKnown RBP eCLIP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 GAS6Q14393 721 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 LIN52Q52LA3 116 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 OR2T5Q6IEZ7 315 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SHQ1Q6PI26 577 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 VTCN1Q7Z7D3 282 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 RNF130Q86XS8 419 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 OR2T29Q8NH02 315 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ZFP28Q8NHY6 868 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 CYGBQ8WWM9 190 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 KCNC2Q96PR1 638 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 TRAPPC9Q96Q05 1148 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 OR2A14Q96R47 310 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 RBM4BQ9BQ04 359 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 C17orf62Q9BQA9 187 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 RBM4Q9BWF3 364 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 NLNQ9BYT8 704 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 GABARAPL1Q9H0R8 117 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 EPB41L1Q9H4G0 881 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 NEUROD4Q9HD90 331 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SIRT3Q9NTG7 399 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ACSL6Q9UKU0 697 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 DUSP12Q9UNI6 340 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 MYRFQ9Y2G1 1151 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 KLK4Q9Y5K2 254 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 GNGT2O14610 69 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SERPIND1P05546 499 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 HIST1H1TP22492 207 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ATP5A1P25705 553 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 CD6P30203 668 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 CHI3L1P36222 383 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 MANFP55145 182 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 PCBP3P57721 371 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 RPS15AP62244 130 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 UBE2IP63279 158 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 VLDLRP98155 873 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 TCEA2Q15560 299 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ZNF630Q2M218 657 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 PRRT3Q5FWE3 981 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 NDUFAF5Q5TEU4 345 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 VN1R4Q7Z5H5 301 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 PATL1Q86TB9 770 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 HIPK1Q86Z02 1210 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SRFBP1Q8NEF9 429 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 SDCCAG3Q96C92 435 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ZBED6CLQ96FA7 236 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 FBXL20Q96IG2 436 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 DOHHQ9BU89 302 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 LMAN1LQ9HAT1 526 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 IFT80Q9P2H3 777 aaPredicted RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 APOBEC3BQ9UH17 382 aaKnown RBP11.65□□□□□ -0.54
CLIP4-203ENST00000401617 ABCG2Q9UNQ0 655 aa11.65□□□□□ -0.54
CLIP4-203ENST00000401617 GON4LQ3T8J9 2241 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 TRBV23OR9-2A0A075B6M9 112 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 A0A1B0GTW7 788 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 MYOCOSA0A1B0GUC4 107 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 A0A1W2PPC4 97 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 TRIM64CA6NLI5 447 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 MAP3K13O43283 966 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 ERI3O43414 337 aaKnown RBP11.64□□□□□ -0.55
CLIP4-203ENST00000401617 CLPTM1O96005 669 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 ALBP02768 609 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 FABP3P05413 133 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 RPL5P46777 297 aaKnown RBP11.64□□□□□ -0.55
CLIP4-203ENST00000401617 ALDH9A1P49189 494 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 SELENOWP63302 87 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 RELAQ04206 551 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 SCARB2Q14108 478 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 FZD2Q14332 565 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 SLC9A5Q14940 896 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 KCTD21Q4G0X4 260 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 CRB2Q5IJ48 1285 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 TOR1AIP1Q5JTV8 583 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 FBXO42Q6P3S6 717 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 ISLR2Q6UXK2 745 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 SLC30A8Q8IWU4 369 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 HS3ST5Q8IZT8 346 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 ACOT4Q8N9L9 421 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 OR5AK3PQ8NH89 298 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 FAM174AQ8TBP5 190 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 NT5CQ8TCD5 201 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 UCN3Q969E3 161 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 TM4SF19Q96DZ7 209 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 NRBF2Q96F24 287 aa11.64□□□□□ -0.55
CLIP4-203ENST00000401617 RMND5BQ96G75 393 aaPredicted RBP11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms