RNA–Protein interactions for RNA: ENST00000401607.6

CPNE1-205, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 1,795 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-205ENST00000401607 SRSF5Q13243 272 aaKnown RBP24.32■■□□□ 1.48
CPNE1-205ENST00000401607 SFT2D3Q587I9 215 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 ZCCHC8Q6NZY4 707 aaKnown RBP24.32■■□□□ 1.48
CPNE1-205ENST00000401607 PTOV1Q86YD1 416 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 EXOSC8Q96B26 276 aaKnown RBP24.32■■□□□ 1.48
CPNE1-205ENST00000401607 SMIM10Q96HG1 83 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 SLC35A5Q9BS91 424 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 VCX3BQ9H321 246 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 GPATCH2Q9NW75 528 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 TAS2R7Q9NYW3 318 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 ATG4BQ9Y4P1 393 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 V9GYQ6 96 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 CACNA1IQ9P0X4 2223 aa24.32■■□□□ 1.48
CPNE1-205ENST00000401607 A0A1W2PR48 441 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 HNRNPRO43390 633 aaKnown RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 PRKRAO75569 313 aaKnown RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 CREG1O75629 220 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 BTN3A2P78410 334 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 SIM2Q14190 667 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 RGNQ15493 299 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 ADRM1Q16186 407 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 GRAMD1BQ3KR37 738 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 NETO1Q8TDF5 533 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 EDAQ92838 391 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 ZNF570Q96NI8 536 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 FAIM2Q9BWQ8 316 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 SEMA6AQ9H2E6 1030 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 SEMA6CQ9H3T2 930 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 ACSL6Q9UKU0 697 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 CORO2BQ9UQ03 480 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 H0YGG7 62 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 NTRK1P04629 796 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 ST6GAL1P15907 406 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 DDX5P17844 614 aaKnown RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 ARF3P61204 181 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 VMACQ2NL98 169 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 LYSMD4Q5XG99 296 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 AMIGO2Q86SJ2 522 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 PDSS2Q86YH6 399 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 TRIML2Q8N7C3 387 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 CAMKVQ8NCB2 501 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 OR5P2Q8WZ92 322 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 NCLNQ969V3 563 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 FAM162AQ96A26 154 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 SEPHS2Q99611 448 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 DPH2Q9BQC3 489 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 LDHAL6BQ9BYZ2 381 aaPredicted RBP24.31■■□□□ 1.48
CPNE1-205ENST00000401607 CXorf36Q9H7Y0 433 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 EHD3Q9NZN3 535 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 FBXW2Q9UKT8 454 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 SNX11Q9Y5W9 270 aa24.31■■□□□ 1.48
CPNE1-205ENST00000401607 CTSKP43235 329 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 CAPZBP47756 277 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 C14orf28Q4W4Y0 310 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 DDX59Q5T1V6 619 aaKnown RBP eCLIP24.3■■□□□ 1.482e-6■■□□□ 13.7
CPNE1-205ENST00000401607 PMS2CLQ68D20 193 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 MAML2Q8IZL2 1156 aaPredicted RBP24.3■■□□□ 1.48
CPNE1-205ENST00000401607 FAM86B1Q8N7N1 296 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 ADCY4Q8NFM4 1077 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 ZCCHC10Q8TBK6 192 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 PPWD1Q96BP3 646 aaKnown RBP24.3■■□□□ 1.48
CPNE1-205ENST00000401607 SLC38A3Q99624 504 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 ERVMER34-1Q9H9K5 563 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 DTNAQ9Y4J8 743 aa24.3■■□□□ 1.48
CPNE1-205ENST00000401607 WASHC1A8K0Z3 465 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TPST1O60507 370 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 AIFM1O95831 613 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 PROS1P07225 676 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 RETP07949 1114 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 NUDT7P0C024 238 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 ACADSP16219 412 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 DHPSP49366 369 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 BNC1Q01954 994 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 MAP7Q14244 749 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 C16orf72Q14CZ0 275 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TEAD4Q15561 434 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 CMPK2Q5EBM0 449 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 ERICH5Q6P6B1 374 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 KLHL35Q6PF15 583 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 OR5AK3PQ8NH89 298 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 FAM60AQ9NP50 221 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 AGPAT4Q9NRZ5 378 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 LAMTOR5O43504 91 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 GUCY1B2O75343 617 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 ATP6V1C1P21283 382 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 COX20Q5RI15 118 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 C18orf63Q68DL7 685 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 ENPP6Q6UWR7 440 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 FBXO30Q8TB52 745 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 RERGQ96A58 199 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 NAF1Q96HR8 494 aaKnown RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TRAPPC9Q96Q05 1148 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 MAPKAP1Q9BPZ7 522 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 SPATA9Q9BWV2 254 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TMEM121BQ9BXQ6 578 aaPredicted RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 EPS8L2Q9H6S3 715 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TMEM74BQ9NUR3 256 aa24.29■■□□□ 1.48
CPNE1-205ENST00000401607 DCAF13Q9NV06 445 aaKnown RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 LYARQ9NX58 379 aaKnown RBP24.29■■□□□ 1.48
CPNE1-205ENST00000401607 TNRC6BQ9UPQ9 1833 aaKnown RBP24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms