RNA–Protein interactions for RNA: ENST00000401473.7

HMGA1-204, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,887 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-204ENST00000401473 WASHC1A8K0Z3 465 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 CYR61O00622 381 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 BMP10O95393 424 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 VIMP08670 466 aaKnown RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 PRR35P0CG20 571 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 ZNF10P21506 573 aaPredicted RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 XCR1P46094 333 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 HNRNPH2P55795 449 aaKnown RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 SPIN4Q56A73 249 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 CCNYL2Q5T2Q4 361 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 CGB2Q6NT52 195 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 NIPAL1Q6NVV3 410 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 NOXRED1Q6NXP6 359 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 SHISA6Q6ZSJ9 500 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 NUDT13Q86X67 352 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 PROSER1Q86XN7 944 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 STT3BQ8TCJ2 826 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 NPLQ9BXD5 320 aaPredicted RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 EBPLQ9BY08 206 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 ROGDIQ9GZN7 287 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 SLC26A1Q9H2B4 701 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 ZNF282Q9UDV7 671 aaPredicted RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 ADAM29Q9UKF5 820 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 FBXW2Q9UKT8 454 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 DLGAP4Q9Y2H0 992 aa15.05■□□□□ -0
HMGA1-204ENST00000401473 POLR3HQ9Y535 204 aaPredicted RBP15.05■□□□□ -0
HMGA1-204ENST00000401473 PTPRQQ9UMZ3 2332 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 NUP214P35658 2090 aaPredicted RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 GOLGA8QA0A0J9YX86 632 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 GOLGA8OA6NCC3 632 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 GOLGA8NF8WBI6 632 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 ALBP02768 609 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 ZGLP1P0C6A0 271 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 FAM58BPP0C7Q3 252 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 PIM1P11309 404 aaPredicted RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 ALOX15P16050 662 aaPredicted RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 TACR1P25103 407 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 DLSTP36957 453 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 EIF2S3P41091 472 aaKnown RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 HNRNPFP52597 415 aaKnown RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 SEC24CP53992 1094 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 NCF4Q15080 339 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 EPGNQ6UW88 154 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 PAGE2Q7Z2X7 111 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 PRSS58Q8IYP2 241 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 KDF1Q8NAX2 398 aaPredicted RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 TMEM52Q8NDY8 209 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 ZCCHC14Q8WYQ9 949 aaKnown RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 MAELQ96JY0 434 aaKnown RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 EGLN2Q96KS0 407 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 CSF3RQ99062 836 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 SPSB2Q99619 263 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 EBF4Q9BQW3 602 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 RBCK1Q9BYM8 510 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 TGIF2Q9GZN2 237 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 CLK4Q9HAZ1 481 aaKnown RBP15.04■□□□□ -0
HMGA1-204ENST00000401473 KCNK13Q9HB14 408 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 IL17BQ9UHF5 180 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 ITPR1Q14643 2758 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 BOD1L1Q8NFC6 3051 aa15.04■□□□□ -0
HMGA1-204ENST00000401473 A0A1W2PR48 441 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 PROM1O43490 865 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 PCDH7O60245 1069 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 CDC123O75794 336 aaPredicted RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 LSP1P33241 339 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 RPS18P62269 152 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 SKP1P63208 163 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 ATP6AP1LQ52LC2 224 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 C18orf63Q68DL7 685 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 CYP20A1Q6UW02 462 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 GPR180Q86V85 440 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 ZC3H7AQ8IWR0 971 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 ENDOVQ8N8Q3 282 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 ZNF248Q8NDW4 579 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 RFWD2Q8NHY2 731 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 PUM2Q8TB72 1066 aaKnown RBP eCLIP15.03■□□□□ -0
HMGA1-204ENST00000401473 TBC1D20Q96BZ9 403 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 TM4SF18Q96CE8 201 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 METTL2AQ96IZ6 378 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 FCRL1Q96LA6 429 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 PPP3R2Q96LZ3 170 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 CNTNAP3BQ96NU0 1288 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 OR52B2Q96RD2 323 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 CNTNAP3Q9BZ76 1288 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 LYRM4Q9HD34 91 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 MKKSQ9NPJ1 570 aaPredicted RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 PFDN4Q9NQP4 134 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 LANCL2Q9NS86 450 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 TEX10Q9NXF1 929 aaPredicted RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 BAIAP2L1Q9UHR4 511 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 MCM8Q9UJA3 840 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 FARSAQ9Y285 508 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 MRPS18BQ9Y676 258 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 TRPC5OSA6NMA1 111 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 PRKRAO75569 313 aaKnown RBP15.03■□□□□ -0
HMGA1-204ENST00000401473 TGDSO95455 350 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 TIA1P31483 386 aaKnown RBP eCLIP15.03■□□□□ -07e-6■■■□□ 17.4
HMGA1-204ENST00000401473 IDH3AP50213 366 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 MAPK12P53778 367 aa15.03■□□□□ -0
HMGA1-204ENST00000401473 AQP5P55064 265 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms