RNA–Protein interactions for RNA: ENST00000400000.6

VAPA-202, Transcript of VAMP associated protein A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPA, Length 6,815 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-202ENST00000400000 FUBP3Q96I24 572 aaKnown RBP eCLIP13.25□□□□□ -0.29
VAPA-202ENST00000400000 TUBGCP5Q96RT8 1024 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GPR62Q9BZJ7 368 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 MUC13Q9H3R2 512 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 SLC2A4RGQ9NR83 387 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 NUDT15Q9NV35 164 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 WASF3Q9UPY6 502 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 A0A1W2PQU0 124 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 PROM1O43490 865 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GNAO1P09471 354 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 H2BFMP0C1H6 154 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CTBP2P56545 445 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ST3GAL4Q11206 333 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 PLD6Q8N2A8 252 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 TMEM175Q9BSA9 504 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 MND1Q9BWT6 205 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 C5AR2Q9P296 337 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ACSL6Q9UKU0 697 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GADD45AP24522 165 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 MAP2K4P45985 399 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 POU3F4P49335 361 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 POU6F2P78424 691 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 C3orf33Q6P1S2 294 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 YTHDF3Q7Z739 585 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 TCEAL3Q969E4 200 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 RAD9AQ99638 391 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 DPH2Q9BQC3 489 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 THUMPD1Q9NXG2 353 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 CBFA2T3O75081 653 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 ROR2Q01974 943 aaKnown RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 RHDQ02161 417 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 STK11Q15831 433 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CRELD2Q6UXH1 353 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 SLC37A3Q8NCC5 494 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 B3GALT1Q9Y5Z6 326 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CICQ96RK0 1608 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 C2orf74A8MZ97 194 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CREG1O75629 220 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 USF2Q15853 346 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 ATAD3CQ5T2N8 411 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GTF2IRD2BQ6EKJ0 949 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GTF2IRD2Q86UP8 949 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 GLB1L3Q8NCI6 653 aaPredicted RBP13.25□□□□□ -0.29
VAPA-202ENST00000400000 MCHR1Q99705 422 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 CD244Q9BZW8 370 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 TIGARQ9NQ88 270 aa13.25□□□□□ -0.29
VAPA-202ENST00000400000 MYO5BQ9ULV0 1848 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 TMEM131LA2VDJ0 1609 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 ADORA3P0DMS8 318 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 HNRNPH3P31942 346 aaKnown RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 GPR4P46093 362 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 PLCXD2Q0VAA5 305 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 ST3GAL3Q11203 375 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 DAG1Q14118 895 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 GPR33Q49SQ1 333 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 CYBRD1Q53TN4 286 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 NUP43Q8NFH3 380 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 DEFB126Q9BYW3 111 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 TPT1P8Q9HAU6 139 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 APOBEC3BQ9UH17 382 aaKnown RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 PADI2Q9Y2J8 665 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 PEAK1Q9H792 1746 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 RCBTB2O95199 551 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 MAS1P04201 325 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 CA3P07451 260 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 HAPLN1P10915 354 aaPredicted RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 SFTPDP35247 375 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 HNRNPA0Q13151 305 aaKnown RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 OR2T5Q6IEZ7 315 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 OR2T29Q8NH02 315 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 F2RL3Q96RI0 385 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 USB1Q9BQ65 265 aaKnown RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 SNAI1O95863 264 aaPredicted RBP13.24□□□□□ -0.29
VAPA-202ENST00000400000 SLC22A16Q86VW1 577 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 PNPLA1Q8N8W4 532 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 THAP6Q8TBB0 222 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 ZDHHC12Q96GR4 267 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 ZNF649Q9BS31 505 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 KCNK13Q9HB14 408 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 USP29Q9HBJ7 922 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 ENTPD6O75354 484 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 CSTAP01040 98 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 SOD2P04179 222 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 DEFB133Q30KQ1 61 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 CCDC58Q4VC31 144 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 CCDC80Q76M96 950 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 APCDD1Q8J025 514 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 RIT1Q92963 219 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 C7orf34Q96L11 122 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 IL3P08700 152 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 VEGFBP49765 207 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 SLC18A2Q05940 514 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 MINDY2Q8NBR6 621 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 EFCAB11Q9BUY7 163 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 OR10A4Q9H209 315 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 DCSTAMPQ9H295 470 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 SPHK2Q9NRA0 654 aa13.24□□□□□ -0.29
VAPA-202ENST00000400000 GIMAP1-GIMAP5A0A087WTJ2 511 aa13.23□□□□□ -0.29
VAPA-202ENST00000400000 CNPY1Q3B7I2 92 aa13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms