RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 EPB41L1Q9H4G0 881 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 PELI2Q9HAT8 420 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 ZNF451Q9Y4E5 1061 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 CABIN1Q9Y6J0 2220 aa13.42□□□□□ -0.26
SCAF4-202ENST00000399804 TSPAN19P0C672 248 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 NPPBP16860 134 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 MYBPC3Q14896 1274 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TMEM35AQ53FP2 167 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 OR56A3Q8NH54 315 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 OR5K2Q8NHB8 316 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 GATA6Q92908 595 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 RBCK1Q9BYM8 510 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 NDEL1Q9GZM8 345 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 PREBQ9HCU5 417 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 RIMS3Q9UJD0 308 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 PCDHA9Q9Y5H5 950 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 BRWD1Q9NSI6 2320 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 PRSS38A1L453 326 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 GPR37L1O60883 481 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TRMUO75648 421 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 EGFP01133 1207 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 H1F0P07305 194 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 SAGP10523 405 aaPredicted RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 SEPHS1P49903 392 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 SRP54P61011 504 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 MRPS21P82921 87 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 PRDX1Q06830 199 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 DGUOKQ16854 277 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 BCL7AQ4VC05 210 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 ZNF311Q5JNZ3 666 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 OR4N5Q8IXE1 308 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 LILRA2Q8N149 483 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 CADM2Q8N3J6 435 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 OR4K14Q8NGD5 310 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 OR56A1Q8NGH5 318 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TESCQ96BS2 214 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 MRGPRX3Q96LB0 322 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 COQ10AQ96MF6 247 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 HHIPQ96QV1 700 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 RPP25Q9BUL9 199 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 ABCG4Q9H172 646 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 EHD1Q9H4M9 534 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TMEM27Q9HBJ8 222 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 A8MU76 341 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 AREL1O15033 823 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 ITPKBP27987 946 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 RPL4P36578 427 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 RGNQ15493 299 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 PRSS36Q5K4E3 855 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 FIGLAQ6QHK4 219 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 GKN2Q86XP6 184 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 KAT2AQ92830 837 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TIMM29Q9BSF4 260 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 TRPM7Q96QT4 1865 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 CD1EP15812 388 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 ATG14Q6ZNE5 492 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 ZZZ3Q8IYH5 903 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 METTL2AQ96IZ6 378 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 C19orf43Q9BQ61 176 aa13.41□□□□□ -0.26
SCAF4-202ENST00000399804 MKRN2Q9H000 416 aaKnown RBP13.41□□□□□ -0.26
SCAF4-202ENST00000399804 LINC00854A0A1B0GVQ3 168 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 CPED1A4D0V7 1026 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 MOSPD3O75425 235 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 CISD3P0C7P0 127 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 OPRD1P41143 372 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 RABIFP47224 123 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ELOCQ15369 112 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 KLHL12Q53G59 568 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 EPHX4Q8IUS5 362 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 OR52N2Q8NGI0 321 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ZHX1-C8orf76Q96EF9 292 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 DTNBP1Q96EV8 351 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ALPK1Q96QP1 1244 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 PHF12Q96QT6 1004 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 GAL3ST4Q96RP7 486 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 IL4I1Q96RQ9 567 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 H3BSA7 217 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 GFRA2O00451 464 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ALOX5P09917 674 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 DBTP11182 482 aaKnown RBP13.4□□□□□ -0.26
SCAF4-202ENST00000399804 PIM1P11309 404 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-202ENST00000399804 IL1RNP18510 177 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 TNFRSF1BP20333 461 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 MLLT3P42568 568 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-202ENST00000399804 SIM1P81133 766 aaPredicted RBP13.4□□□□□ -0.26
SCAF4-202ENST00000399804 KCNC4Q03721 635 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 HYAL2Q12891 473 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 TIMM50Q3ZCQ8 353 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 NRROSQ86YC3 692 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 ZNF583Q96ND8 569 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 COPS4Q9BT78 406 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 SLC6A16Q9GZN6 736 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 SLC35C2Q9NQQ7 365 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 TVP23BQ9NYZ1 205 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 PLEKHM1Q9Y4G2 1056 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 UTRNP46939 3433 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 C1orf226A1L170 272 aa13.4□□□□□ -0.26
SCAF4-202ENST00000399804 DENRO43583 198 aaKnown RBP13.4□□□□□ -0.26
SCAF4-202ENST00000399804 CFIP05156 583 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms