RNA–Protein interactions for RNA: ENST00000398738.2

PTCHD4-202, Transcript of patched domain containing 4, humanhuman

TSL 1 (best)

Gene PTCHD4, Length 3,232 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-202ENST00000398738 RFLNAQ6ZTI6 216 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 TSEN54Q7Z6J9 526 aaKnown RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 OR8H3Q8N146 312 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 VWA5B2Q8N398 1253 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 FAM109AQ8N4B1 249 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 CARNMT1Q8N4J0 409 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 OR4A15Q8NGL6 344 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 TM9SF2Q99805 663 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 P2RY12Q9H244 342 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 PDFQ9HBH1 243 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 GALNT9Q9HCQ5 603 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ACOXLQ9NUZ1 547 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 SSR3Q9UNL2 185 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 KLK4Q9Y5K2 254 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 A3GALT2U3KPV4 340 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 PAPPA2Q9BXP8 1791 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 LOC105371267A0A1B0GV96 52 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 GJB5O95377 273 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 GASTP01350 101 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 HIST1H2AGP0C0S8 130 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 EPORP19235 508 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 POU3F3P20264 500 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 HIST1H2ADP20671 130 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 CLCN4P51793 760 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 POU6F2P78424 691 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 DUSP4Q13115 394 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ZXDCQ2QGD7 858 aaPredicted RBP9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 C5orf22Q49AR2 442 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 CTXN3Q4LDR2 81 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 FLYWCH1Q4VC44 716 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 PLAG1Q6DJT9 500 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ANKS3Q6ZW76 656 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 USP30Q70CQ3 517 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 SHFQ7M4L6 423 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ZNF367Q7RTV3 350 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 TCEANCQ8N8B7 351 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 RASSF5Q8WWW0 418 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 USP7Q93009 1102 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 HIST1H2AHQ96KK5 128 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 HIST1H2AJQ99878 128 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 H2AFJQ9BTM1 129 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 TMEM45AQ9NWC5 275 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 NPAP1Q9NZP6 1156 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 MAN2B2Q9Y2E5 1009 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 ALG5Q9Y673 324 aa9.46□□□□□ -0.89
PTCHD4-202ENST00000398738 PDCD11Q14690 1871 aaKnown RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MN1Q10571 1320 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 IGLV3-10A0A075B6K4 115 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC35F4A4IF30 521 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MYADML2A6NDP7 307 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MGAT4DA6NG13 374 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TEX28O15482 410 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 PRAMEF4O60810 478 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 NCR1O76036 304 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 GADD45GO95257 159 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 AMD1P17707 334 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 ITGALP20701 1170 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 CHMP24386 653 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MAPK12P53778 367 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 PSPHP78330 225 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MRPL28Q13084 256 aaKnown RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TUSC3Q13454 348 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TTLL9Q3SXZ7 439 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 XKR6Q5GH73 641 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 CPTPQ5TA50 214 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 PRAMEF9Q5VWM5 478 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 FRG2Q64ET8 278 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 SAXO2Q658L1 398 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 RBFAQ8N0V3 343 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 C1orf52Q8N6N3 182 aaKnown RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 C11orf65Q8NCR3 313 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 FRG2BQ96QU4 278 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 WACQ9BTA9 647 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TTLL2Q9BWV7 592 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 GABARAPL3Q9BY60 117 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 SLC32A1Q9H598 525 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 IL26Q9NPH9 171 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TVP23BQ9NYZ1 205 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 TRPS1Q9UHF7 1281 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 MBD1Q9UIS9 605 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 NDRG2Q9UN36 371 aaKnown RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 POFUT2Q9Y2G5 429 aa9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 SPIN1Q9Y657 262 aaPredicted RBP9.46□□□□□ -0.9
PTCHD4-202ENST00000398738 DRGXA6NNA5 263 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 GABRR3A8MPY1 467 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 I3L521 148 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 GPX2P18283 190 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 PRPS1L1P21108 318 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 WNT3P56703 355 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 FCHO2Q0JRZ9 810 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 IL18Q14116 193 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF267Q14586 743 aaPredicted RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 LARS2Q15031 903 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 MICAQ29983 383 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 WSCD2Q2TBF2 565 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ZNF284Q2VY69 593 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 RNASE12Q5GAN4 147 aaKnown RBP9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 ASB18Q6ZVZ8 466 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 TSPAN33Q86UF1 283 aa9.45□□□□□ -0.9
PTCHD4-202ENST00000398738 EPYCQ99645 322 aa9.45□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms