RNA–Protein interactions for RNA: ENST00000398417.6

SMAD4-202, Transcript of SMAD family member 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SMAD4, Length 8,495 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-202ENST00000398417 C5AR2Q9P296 337 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CRNNQ9UBG3 495 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CORO2BQ9UQ03 480 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TLL1O43897 1013 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 B3GALNT1O75752 331 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LATS1O95835 1130 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PPIGQ13427 754 aaKnown RBP eCLIP4.73□□□□□ -1.658e-6■■■■□ 22.7
SMAD4-202ENST00000398417 GAB1Q13480 694 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GPNMBQ14956 572 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 EEF1AKMT2Q5JPI9 291 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PRSS36Q5K4E3 855 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ARMC4Q5T2S8 1044 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DUS1LQ6P1R4 473 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ANKRD13BQ86YJ7 626 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RAB42Q8N4Z0 105 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF740Q8NDX6 193 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 OR8D1Q8WZ84 308 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C3orf14Q9HBI5 128 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 IMP3Q9NV31 184 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ING3Q9NXR8 418 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 REV1Q9UBZ9 1251 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MAN2B2Q9Y2E5 1009 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ANKRD36CQ5JPF3 1778 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MEN1O00255 615 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 QSOX1O00391 747 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 RFPL2O75678 378 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ABLIM3O94929 683 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CPNE6O95741 557 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LIPAP38571 399 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ASMTP46597 345 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF404Q494X3 552 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TCEAL5Q5H9L2 206 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 COX20Q5RI15 118 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DCST1Q5T197 706 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DEPDC1Q5TB30 811 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ARMC8Q8IUR7 673 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FAM20CQ8IXL6 584 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 AMER2Q8N7J2 671 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C7orf57Q8NEG2 295 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 HUS1BQ8NHY5 278 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ASB11Q8WXH4 323 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ISG20Q96AZ6 181 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MSANTD3Q96H12 275 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 FAM129BQ96TA1 746 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NIPSNAP1Q9BPW8 284 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TIMM29Q9BSF4 260 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TPK1Q9H3S4 243 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GPN2Q9H9Y4 310 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SIRT5Q9NXA8 310 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF226Q9NYT6 803 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TMEFF2Q9UIK5 374 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 BTNL2Q9UIR0 455 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 CAB39Q9Y376 341 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ESPL1Q14674 2120 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TBC1D3BA6NDS4 549 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 YY2O15391 372 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 LATO43561 262 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GPR37L1O60883 481 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PRKRAO75569 313 aaKnown RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PSMB5P28074 263 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 NKX2-5P52952 324 aaPredicted RBP4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PFN3P60673 137 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PPP2R2BQ00005 443 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MVKQ03426 396 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PRAMEF14Q5SWL7 426 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 PRAMEF13Q5VWM6 474 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 SLC39A5Q6ZMH5 540 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 GAREM2Q75VX8 874 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 C17orf64Q86WR6 236 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ALDH16A1Q8IZ83 802 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF614Q8N883 585 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 OR52N2Q8NGI0 321 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 OR2A12Q8NGT7 310 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TMEM203Q969S6 136 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 DOHHQ9BU89 302 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 MAT2BQ9NZL9 334 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 TMED5Q9Y3A6 229 aa4.73□□□□□ -1.65
SMAD4-202ENST00000398417 WASH3PC4AMC7 463 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PITPNM1O00562 1244 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PDPK1O15530 556 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ARHGEF9O43307 516 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CAPNS1P04632 268 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 QDPRP09417 244 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ACP5P13686 325 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ZNF30P17039 623 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HLA-FP30511 346 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NRIP1P48552 1158 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SEC13P55735 322 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 LHX8Q68G74 356 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 SYCE2Q6PIF2 218 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 PLEKHM3Q6ZWE6 761 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HTR3DQ70Z44 454 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 GRASPQ7Z6J2 395 aaPredicted RBP4.72□□□□□ -1.65
SMAD4-202ENST00000398417 HORMAD2Q8N7B1 307 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 AQP11Q8NBQ7 271 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 ACOT12Q8WYK0 555 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 GLYATL1Q969I3 302 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 CCDC115Q96NT0 180 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 NRTNQ99748 197 aa4.72□□□□□ -1.65
SMAD4-202ENST00000398417 BCL2L14Q9BZR8 327 aa4.72□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms