RNA–Protein interactions for RNA: ENST00000397901.7

CHMP1A-201, Transcript of charged multivesicular body protein 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP1A, Length 2,483 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-201ENST00000397901 RAD9AQ99638 391 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 GABARAPL3Q9BY60 117 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 RLIMQ9NVW2 624 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC23A1Q9UHI7 598 aa15.32■□□□□ 0.04
CHMP1A-201ENST00000397901 LOC101059915A0A1B0GWI6 518 aaPredicted RBP15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 EFCAB10A6NFE3 127 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 I3L521 148 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 TNFRSF11BO00300 401 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SERPINI2O75830 405 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 PDE9AO76083 593 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 CBSLP0DN79 551 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 CBSP35520 551 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC6A12P48065 614 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 DAB2P98082 770 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF79Q15937 498 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC35F1Q5T1Q4 408 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ZBTB37Q5TC79 503 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 TMEM65Q6PI78 240 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 PLEKHM3Q6ZWE6 761 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC5A8Q8N695 610 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 C2orf15Q8WU43 125 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 COQ8BQ96D53 544 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ASIC4Q96FT7 647 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 EPYCQ99645 322 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 TMEM175Q9BSA9 504 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC12A9Q9BXP2 914 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 DNAJC11Q9NVH1 559 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ZDHHC3Q9NYG2 299 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 TAS2R16Q9NYV7 291 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ATPIF1Q9UII2 106 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 PCDHB11Q9Y5F2 797 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SCN5AQ14524 2016 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 PTHP01270 115 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 CHMP24386 653 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 GGT2P36268 569 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 LRRC73Q5JTD7 316 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 MLIPQ5VWP3 458 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ANGPTL8Q6UXH0 198 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF783Q6ZMS7 281 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR155Q7Z3F1 870 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 KRT73Q86Y46 540 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 OR8H1Q8NGG4 311 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 OR10Z1Q8NGY1 313 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR151Q8TDV0 419 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 UTP15Q8TED0 518 aaKnown RBP15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ALG14Q96F25 216 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 COL21A1Q96P44 957 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 ABCB8Q9NUT2 735 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SPASTQ9UBP0 616 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 PCDHGB3Q9Y5G1 929 aa15.31■□□□□ 0.04
CHMP1A-201ENST00000397901 SCN8AQ9UQD0 1980 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 CLCA1A8K7I4 914 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 E9PQ18 207 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 PITPNM1O00562 1244 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC22A5O76082 557 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 ACPPP15309 386 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 TNNI3P19429 210 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 CD22P20273 847 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 AZGP1P25311 298 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 OR1E2P47887 323 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 SOX9P48436 509 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 IRF8Q02556 426 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 ABRQ12979 859 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 STK11Q15831 433 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 LRRC66Q68CR7 880 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 CRTC1Q6UUV9 634 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 PAMR1Q6UXH9 720 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 TSEN54Q7Z6J9 526 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 CDH24Q86UP0 819 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 STX19Q8N4C7 294 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 DCAF4L2Q8NA75 395 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 CRELD1Q96HD1 420 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 NECTIN4Q96NY8 510 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 WDFY2Q96P53 400 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC22A12Q96S37 553 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 DUSP26Q9BV47 211 aa15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 C11orf54Q9H0W9 315 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 GPBP1L1Q9HC44 474 aaPredicted RBP15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 FAM120CQ9NX05 1096 aaKnown RBP15.3■□□□□ 0.04
CHMP1A-201ENST00000397901 SLC35F4A4IF30 521 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 H3BUI4 141 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 GFRA2O00451 464 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 HOXA2O43364 376 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 MTX2O75431 263 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 GAB1Q13480 694 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 VEZF1Q14119 521 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 GPR19Q15760 415 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 CYP27C1Q4G0S4 372 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 ADNP2Q6IQ32 1131 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 SERPINA13PQ6UXR4 307 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 ZNF782Q6ZMW2 699 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 KIF18BQ86Y91 864 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 HJURPQ8NCD3 748 aaPredicted RBP15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 OR10G2Q8NGC3 310 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 ASB11Q8WXH4 323 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 SPATA9Q9BWV2 254 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 TMEM245Q9H330 911 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 PCDH10Q9P2E7 1040 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 TMEM229AB2RXF0 380 aa15.29■□□□□ 0.04
CHMP1A-201ENST00000397901 JUPP14923 745 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms