RNA–Protein interactions for RNA: ENST00000397761.6

PDLIM2-205, Transcript of PDZ and LIM domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PDLIM2, Length 1,491 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-205ENST00000397761 PPCDCQ96CD2 204 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 CLPTM1LQ96KA5 538 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 CCDC115Q96NT0 180 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 CDRT15Q96T59 188 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC39A3Q9BRY0 314 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 PAIP1Q9H074 479 aaKnown RBP18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 SOHLH2Q9NX45 425 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 SLC7A8Q9UHI5 535 aa18.47■□□□□ 0.55
PDLIM2-205ENST00000397761 C15orf38-AP3S2A0A0A6YYH1 394 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 PRSS51A0A1B0GVH4 220 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 RNASET2O00584 256 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 CDX4O14627 284 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 MAP3K7O43318 606 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 B3GALT4O96024 378 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 EIF2S1P05198 315 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 RPLP0P05388 317 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 CTSBP07858 339 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 NELFEP18615 380 aaKnown RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 ZNF10P21506 573 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 NBL1P41271 181 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 BTN3A2P78410 334 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 DAB2P98082 770 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 PRSS53Q2L4Q9 553 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 MPEG1Q2M385 716 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 SPATS1Q496A3 300 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 DEFB134Q4QY38 66 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 TCTE1Q5JU00 501 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 ANXA8L1Q5VT79 327 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 ARPINQ7Z6K5 226 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 MSRB3Q8IXL7 192 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 FBXW8Q8N3Y1 598 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 NATD1Q8N6N6 113 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM47BQ8NA70 645 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 FAM13CQ8NE31 585 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 ZCCHC10Q8TBK6 192 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 CGREF1Q99674 301 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 COPS7BQ9H9Q2 264 aaPredicted RBP18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 IL1RL2Q9HB29 575 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 KCMF1Q9P0J7 381 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 KLHL3Q9UH77 587 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 PCDHA9Q9Y5H5 950 aa18.46■□□□□ 0.55
PDLIM2-205ENST00000397761 A0A1W2PR48 441 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 PROB1E7EW31 1015 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 PROM1O43490 865 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 GALR3O60755 368 aaPredicted RBP18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 GP1BAP07359 652 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 CEACAM7Q14002 265 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 NDUFAF5Q5TEU4 345 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 GARNL3Q5VVW2 1013 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 ARHGAP22Q7Z5H3 698 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 PDSS2Q86YH6 399 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 TICAM1Q8IUC6 712 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 SLC15A3Q8IY34 581 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 MMP21Q8N119 569 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 VPS37AQ8NEZ2 397 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 TMEM125Q96AQ2 219 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 PHF12Q96QT6 1004 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 FAIM2Q9BWQ8 316 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 LYRM4Q9HD34 91 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 MIEF1Q9NQG6 463 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 PRDM9Q9NQV7 894 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 SLC25A37Q9NYZ2 338 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 VAPAQ9P0L0 249 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 SH3BP4Q9P0V3 963 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 CD300AQ9UGN4 299 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 ERVK-11Q9UQG0 969 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 ATG4BQ9Y4P1 393 aa18.46■□□□□ 0.54
PDLIM2-205ENST00000397761 GVINP1Q7Z2Y8 2422 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 NTN3O00634 580 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 LRP3O75074 770 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 CKMT2P17540 419 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 DDX5P17844 614 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 ACP1P24666 158 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 FRKP42685 505 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 GCGRP47871 477 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 SLC7A2P52569 658 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 ELF3P78545 371 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 FAM53BQ14153 422 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 CAPRIN1Q14444 709 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 SF3A2Q15428 464 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 C6orf10Q5SRN2 563 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 NANOGP8Q6NSW7 305 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 OR8J3Q8NGG0 315 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 GOT1L1Q8NHS2 421 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 MIEF2Q96C03 454 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 CNDP2Q96KP4 475 aaKnown RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 C10orf90Q96M02 699 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 ANKRD27Q96NW4 1050 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 MAPKAP1Q9BPZ7 522 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 INPP5KQ9BT40 448 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 NPLQ9BXD5 320 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 NANOGQ9H9S0 305 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 STARD5Q9NSY2 213 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 CMTM6Q9NX76 183 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 PHF11Q9UIL8 331 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 ATXN7L1Q9ULK2 861 aaPredicted RBP18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 GMEB1Q9Y692 573 aa18.45■□□□□ 0.54
PDLIM2-205ENST00000397761 C1orf226A1L170 272 aa18.44■□□□□ 0.54
PDLIM2-205ENST00000397761 NME4O00746 187 aa18.44■□□□□ 0.54
PDLIM2-205ENST00000397761 B3GALT2O43825 422 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms