RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 SLC6A15Q9H2J7 730 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 SGK2Q9HBY8 427 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ZNF160Q9HCG1 818 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ZNF275Q9NSD4 429 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ERRFI1Q9UJM3 462 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 DICER1Q9UPY3 1922 aaKnown RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 SCN4AP35499 1836 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TRAV26-1A0A087WT03 109 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 A0A1W2PPV4 95 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 CD8B2A6NJW9 211 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 HOXA3O43365 443 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 PLPP2O43688 288 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 LUC7L3O95232 432 aaKnown RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TOP3BO95985 862 aaKnown RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 RETP07949 1114 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 VSIG8P0DPA2 414 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TAL1P17542 331 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ITGB6P18564 788 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ARL4AP40617 200 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 CDK3Q00526 305 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 CHRNEQ04844 493 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 MERTKQ12866 999 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 NAE1Q13564 534 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 PRKD1Q15139 912 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TRIP10Q15642 601 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 WHAMMP3Q1A5X7 153 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TSTD2Q5T7W7 516 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 AGAP6Q5VW22 663 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TRIM65Q6PJ69 517 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 RPTNQ6XPR3 784 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ZSWIM9Q86XI8 627 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 MEX3DQ86XN8 651 aaKnown RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 VRK2Q86Y07 508 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 MAPKAPK5Q8IW41 473 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 LRRC34Q8IZ02 419 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 MCPH1Q8NEM0 835 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 KCNG3Q8TAE7 436 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 TNFRSF14Q92956 283 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 ZNF48Q96MX3 618 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 FRMD8Q9BZ67 464 aaPredicted RBP6.39□□□□□ -1.39
SMCO1-201ENST00000397537 GGA2Q9UJY4 613 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 FBXO4Q9UKT5 387 aa6.39□□□□□ -1.39
SMCO1-201ENST00000397537 INSRP06213 1382 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ADGRB1O14514 1584 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 E7ENX8 843 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 F5H697 171 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 NR5A2O00482 541 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 MDM4O15151 490 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 PMPCBO75439 489 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 GMNNO75496 209 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 DFFBO76075 338 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CHRNGP07510 517 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CREB1P16220 341 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 DUSP1P28562 367 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ANXA11P50995 505 aaKnown RBP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CCL11P51671 97 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CHN2P52757 468 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 POLR2GP62487 172 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CSNK2A1P68400 391 aaPredicted RBP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 RHAGQ02094 409 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CFHR1Q03591 330 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 FGL1Q08830 312 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ITGB3BPQ13352 177 aaPredicted RBP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 SPCS2Q15005 226 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CPSF6Q16630 551 aaKnown RBP eCLIP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ZMAT1Q5H9K5 638 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 PRR27Q6MZM9 219 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 COPS6Q7L5N1 327 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 GRASPQ7Z6J2 395 aaPredicted RBP6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ADGRE4PQ86SQ3 457 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 FAM124AQ86V42 546 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 FBXL6Q8N531 539 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 PNPLA1Q8N8W4 532 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CSNK2A3Q8NEV1 391 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 TBC1D16Q8TBP0 767 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 SAP25Q8TEE9 199 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 IFT81Q8WYA0 676 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 GLG1Q92896 1179 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 LPPQ93052 612 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 OPTNQ96CV9 577 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 RSPRY1Q96DX4 576 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CASD1Q96PB1 797 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 C17orf62Q9BQA9 187 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 IDI2Q9BXS1 227 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 MFFQ9GZY8 342 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 CENPHQ9H3R5 247 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 RAB18Q9NP72 206 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 EURLQ9NYK6 297 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 FLRT1Q9NZU1 646 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 HACD3Q9P035 362 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 SLAMF8Q9P0V8 285 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 B9D1Q9UPM9 204 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 SNX11Q9Y5W9 270 aa6.38□□□□□ -1.39
SMCO1-201ENST00000397537 ELP1O95163 1332 aa6.37□□□□□ -1.39
SMCO1-201ENST00000397537 METTL21EPA6NDL7 271 aa6.37□□□□□ -1.39
SMCO1-201ENST00000397537 MATN2O00339 956 aa6.37□□□□□ -1.39
SMCO1-201ENST00000397537 VCYO14598 125 aa6.37□□□□□ -1.39
SMCO1-201ENST00000397537 INPPL1O15357 1258 aa6.37□□□□□ -1.39
SMCO1-201ENST00000397537 EIF3HO15372 352 aaKnown RBP eCLIP6.37□□□□□ -1.39
SMCO1-201ENST00000397537 PEX1O43933 1283 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms