RNA–Protein interactions for RNA: ENST00000397411.6

TSPAN4-207, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,025 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-207ENST00000397411 TUBB6Q9BUF5 446 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 SORBS1Q9BX66 1292 aaKnown RBP23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 SLC29A3Q9BZD2 475 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 ZNF700Q9H0M5 742 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 STMN4Q9H169 189 aaPredicted RBP23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 LYRM4Q9HD34 91 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 PRTFDC1Q9NRG1 225 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 DAPP1Q9UN19 280 aa23.87■■□□□ 1.41
TSPAN4-207ENST00000397411 IGHV3-20A0A0C4DH32 117 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 GOLGA6L10A6NI86 522 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 PLPP1O14494 284 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 CEACAM4O75871 244 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 PDYNP01213 254 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ALPPP05187 535 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ENO1P06733 434 aaKnown RBP23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ICAM2P13598 275 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 CREB1P16220 341 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 CPN2P22792 545 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 TSFMP43897 325 aaKnown RBP23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ARFIP1P53367 373 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 SLC13A2Q13183 592 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 SFT2D3Q587I9 215 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ZNF793Q6ZN11 406 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 QSOX2Q6ZRP7 698 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 TSLPQ969D9 159 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 FARSBQ9NSD9 589 aaKnown RBP23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ZNF225Q9UK10 706 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 SLC12A4Q9UP95 1085 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 ZNF451Q9Y4E5 1061 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 MMACHCQ9Y4U1 282 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 PIEZO2Q9H5I5 2752 aa23.86■■□□□ 1.41
TSPAN4-207ENST00000397411 H3BQF6 201 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 MANBAO00462 879 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 ULK1O75385 1050 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 SEC24DO94855 1032 aaPredicted RBP23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 ESRRBO95718 433 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 NR1D1P20393 614 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 EFNA3P52797 238 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 AP2B1P63010 937 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 MYBPC3Q14896 1274 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 PCLAFQ15004 111 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 PTRH1Q86Y79 214 aaKnown RBP23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 ZNF595Q8IYB9 648 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 EFCAB3Q8N7B9 438 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 MAPKAP1Q9BPZ7 522 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 NUDT9Q9BW91 350 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 LHPPQ9H008 270 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 KCNK9Q9NPC2 374 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 PPT2Q9UMR5 302 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 LOC400499M0QZD8 3231 aa23.85■■□□□ 1.41
TSPAN4-207ENST00000397411 ARHGAP10A1A4S6 786 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 ETHE1O95571 254 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 MAOAP21397 527 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 ALDH3A1P30838 453 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 TLX1P31314 330 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 SOX8P57073 446 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 C19orf57Q0VDD7 668 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 PCOLCEQ15113 449 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 FRMD7Q6ZUT3 714 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 EXOC3L1Q86VI1 746 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 LPAR4Q99677 370 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 MS4A12Q9NXJ0 267 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 PHF11Q9UIL8 331 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 PCDHGB7Q9Y5F8 929 aa23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 HEMK1Q9Y5R4 338 aaPredicted RBP23.84■■□□□ 1.41
TSPAN4-207ENST00000397411 TNRC6AQ8NDV7 1962 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 SEMA3DO95025 777 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 HSD17B7P56937 341 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 VWA5B1Q5TIE3 1220 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 AGAP7PQ5VUJ5 663 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 PAGE2Q7Z2X7 111 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 GPR180Q86V85 440 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 NUDT13Q86X67 352 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 TEX19Q8NA77 164 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 AGAP11Q8TF27 550 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 PGM2Q96G03 612 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 CNDP1Q96KN2 507 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 AGAP4Q96P64 663 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 GATA5Q9BWX5 397 aaPredicted RBP23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 SHCBP1LQ9BZQ2 653 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 BRF2Q9HAW0 419 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 NECTIN3Q9NQS3 549 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 ARGLU1Q9NWB6 273 aaPredicted RBP23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 LYARQ9NX58 379 aaKnown RBP23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 KCMF1Q9P0J7 381 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 TIMM22Q9Y584 194 aa23.83■■□□□ 1.41
TSPAN4-207ENST00000397411 A0A1W2PQ72 361 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 A8MUA0 341 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 K7EM74 188 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 SCELO95171 688 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 SERPINA7P05543 415 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 BSGP35613 385 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 STX4Q12846 297 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 BTBD16Q32M84 506 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 TCHHL1Q5QJ38 904 aaPredicted RBP23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 PAPD4Q6PIY7 484 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 CLNKQ7Z7G1 428 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 ZCCHC7Q8N3Z6 543 aaKnown RBP23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 PPP1R14CQ8TAE6 165 aa23.82■■□□□ 1.4
TSPAN4-207ENST00000397411 CSF3RQ99062 836 aa23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms